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13_1_20cm_2_scaffold_1882

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1882_1
unknown

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_2_scaffold_1882_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(161..1219)
DNA (1059bp) protein (353aa)
thrC_2; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
thrC_2; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTN7_PERMH rbh
13_1_20cm_2_scaffold_1882_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1216..2523)
DNA (1308bp) protein (436aa)
hom; homoserine dehydrogenase (EC:1.1.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL5_9BACT rbh
13_1_20cm_2_scaffold_1882_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2534..3703)
DNA (1170bp) protein (390aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1)
Putative PLP-dependent aminotransferase, putative aspartate aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFN2_9BACT
13_1_20cm_2_scaffold_1882_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3938..4948
DNA (1011bp) protein (337aa)
Peptidase M23 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLF9_9BACT
peptidase M23B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
M23 peptidase domain-containing protein
13_1_20cm_2_scaffold_1882_6
unknown

Not on your lists

5016..5267
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_2_scaffold_1882_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5248..6033)
DNA (786bp) protein (262aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WYV8_9NOST
alpha/beta fold family hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative hydrolase or acyltransferase of alpha/beta superfamily
13_1_20cm_2_scaffold_1882_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6294..7280)
DNA (987bp) protein (329aa)
oppF; oligopeptide ABC transporter ATP-binding protein (EC:3.6.3.27); K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
oppF; peptide ABC transporter ATP-binding protein (EC:3.6.3.27)
Peptide ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K3W6_9PROT rbh
13_1_20cm_2_scaffold_1882_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7292..8215)
DNA (924bp) protein (308aa)
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24)
Peptide ABC transporter ATP-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMZ3_9PROT
13_1_20cm_2_scaffold_1882_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8224..9279)
DNA (1056bp) protein (352aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Threonine aldolase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LQ8_SYMTH
threonine aldolase
13_1_20cm_2_scaffold_1882_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(9302..10054)
DNA (753bp) protein (251aa)
Outer membrane protein assembly factor BamD n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFP2_AZOBR
tetratricopeptide TPR_2 repeat protein; K05807 putative lipoprotein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
putative lipoprotein
13_1_20cm_2_scaffold_1882_12
unknown

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comp(10103..10927)
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_20cm_2_scaffold_1882_13
unknown

Not on your lists

comp(10990..11199)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_1882_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11442..12299
DNA (858bp) protein (286aa)
hypothetical protein n=2 Tax=unclassified candidate division EM 19 RepID=UPI00037EA031
alcohol dehydrogenase GroES-like protein Tax=CSP1_6_Rokubacteria
alcohol dehydrogenase GroES-like protein
13_1_20cm_2_scaffold_1882_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12377..14158
DNA (1782bp) protein (594aa)
glycosyl hydrolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379AC6
Glycosyl hydrolase {ECO:0000313|EMBL:EWT05418.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
glycosyl hydrolase
13_1_20cm_2_scaffold_1882_16
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14155..14637
DNA (483bp) protein (161aa)
Predicted protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6XA12_STRPR
Predicted protein {ECO:0000313|EMBL:EFH30894.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.
hypothetical protein
13_1_20cm_2_scaffold_1882_17
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14630..15424)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WZF6_RHIFR
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_1_20cm_2_scaffold_1882_18
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15430..18021)
DNA (2592bp) protein (864aa)
Abc transporter n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VYG8_9CYAN rbh
Abc transporter {ECO:0000313|EMBL:ESA35818.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
ABC transporter-like protein
13_1_20cm_2_scaffold_1882_19
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18023..18892)
DNA (870bp) protein (290aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FJY1_9CYAN rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:EKV03168.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
inner-membrane translocator
13_1_20cm_2_scaffold_1882_20
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(18944..20128)
DNA (1185bp) protein (395aa)
Receptor family ligand binding region n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTM4_9SYNE rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1 Tax=RBG_16_NC10_65_8_curated
ethanolamine utilization protein EutN
13_1_20cm_2_scaffold_1882_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20227..20727)
DNA (501bp) protein (167aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=GWA2_Rokubacteria_73_35_curated
Transcriptional regulator, ArsR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVU4_9CHLR
N-acetyltransferase GCN5
Displaying 21 items

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