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13_1_20cm_2_scaffold_2456

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2456_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..1079)
DNA (1077bp) protein (359aa)
Acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
dap:Dacet_2513 acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] alias=scaffold_29_2,RBG2_C00029G00002 id=1243057 tax=RBG2 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres
Acetyl-CoA acetyltransferase-like protein
13_1_20cm_2_scaffold_2456_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1577..1840)
DNA (264bp) protein (88aa)
Putative ferredoxin n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHU8_ACTM4
fdxC; putative ferredoxin Tax=GWA2_Rokubacteria_73_35_curated
fdxC; putative ferredoxin
13_1_20cm_2_scaffold_2456_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1951..2853)
DNA (903bp) protein (301aa)
Putative peptide ABC transporter permease protein n=1 Tax=uncultured marine bacterium MedDCM-OCT-S11-C95 RepID=D6PE72_9BACT
uncharacterized LOC100637730 Tax=GWA2_Rokubacteria_73_35_curated
glutathione transport system permease GsiD
13_1_20cm_2_scaffold_2456_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2980..3933)
DNA (954bp) protein (318aa)
Dipeptide transport system permease protein DppB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJN3_OLICO
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
dipeptide transport system permease DppB
13_1_20cm_2_scaffold_2456_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3959..5551)
DNA (1593bp) protein (531aa)
Probable ABC transporter substrate binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U302_9PROT
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_2456_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5615..6598)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003691FC3
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_2_scaffold_2456_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6595..7647)
DNA (1053bp) protein (351aa)
Putative ABC transporter n=1 Tax=uncultured marine microorganism HF4000_010I05 RepID=B3T1M3_9ZZZZ rbh
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
peptide ABC transporter ATPase
13_1_20cm_2_scaffold_2456_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7715..8968)
DNA (1254bp) protein (418aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXS3_HERA2
group 1 glycosyl transferase
13_1_20cm_2_scaffold_2456_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8965..9942)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3Y5_DEHLB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_2456_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9939..10196)
DNA (258bp) protein (86aa)
Putative regulatory protein, FmdB family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWN4_HERA2
regulatory protein, FmdB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FmdB family regulatory protein
13_1_20cm_2_scaffold_2456_11
unknown

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10402..10632
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_2_scaffold_2456_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10622..11545)
DNA (924bp) protein (308aa)
glycosyl transferase group 1 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 alias=gwe2_scaffold_23_14 id=1898936 tax=GWE2_OD1_38_254 species=Thermoanaerobacter italicus Ab9 genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
glycosyl transferase group 1 protein
13_1_20cm_2_scaffold_2456_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11697..13349)
DNA (1653bp) protein (551aa)
thiamine pyrophosphate protein central region; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thiamine pyrophosphate protein central region n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9A1_ANADF
thiamine pyrophosphate protein central region
13_1_20cm_2_scaffold_2456_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13360..14031)
DNA (672bp) protein (224aa)
putative FMN reductase (EC:1.5.1.29); K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative FMN reductase (EC:1.5.1.29)
Putative FMN reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB81_9BACT
13_1_20cm_2_scaffold_2456_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14028..14963)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036C28EF
luciferase family protein Tax=GWA2_Rokubacteria_70_23_curated
putative F420-dependent dehydrogenase
13_1_20cm_2_scaffold_2456_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14960..17020)
DNA (2061bp) protein (687aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTK8_ALIAD rbh
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short chain dehydrogenase
13_1_20cm_2_scaffold_2456_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17153..17689)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003764836
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_2456_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17710..18441
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B786F5
serine/threonine-protein kinase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
serine/threonine-protein kinase pkn1
13_1_20cm_2_scaffold_2456_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18441..18782
DNA (342bp) protein (114aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Medium-chain fatty acid-CoA ligase n=1 Tax=Bacillus sp. SG-1 RepID=A6CKR7_9BACI
medium-chain-fatty-acid--CoA ligase
Displaying 19 items

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