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13_1_20cm_2_scaffold_2711

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2711_1
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=Pseudomonas sp. GM49 RepID=J2RLF2_9PSED
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD
membrane protein
13_1_20cm_2_scaffold_2711_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(578..1096)
DNA (519bp) protein (173aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
rpoE; RNA polymerase sigma-70 factor, sigma-E factor
13_1_20cm_2_scaffold_2711_3
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1200..1511
DNA (312bp) protein (104aa)
Amicyanin n=1 Tax=Mycobacterium abscessus RepID=UPI0002F34871
Um strain SMUC14 PROKKA_contig000040, whole genome shotgun sequence {ECO:0000313|EMBL:KIU37875.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;"
amicyanin-alpha
13_1_20cm_2_scaffold_2711_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1535..2443
DNA (909bp) protein (303aa)
Metallophosphoesterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A36_SOLUE
Metallophosphoesterase {ECO:0000313|EMBL:ABJ82090.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="
metallophosphoesterase
13_1_20cm_2_scaffold_2711_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2444..3796)
DNA (1353bp) protein (451aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWC2_Rokubacteria_70_16_curated
sigma-54 dependent DNA-binding response regulator
13_1_20cm_2_scaffold_2711_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3796..5286)
DNA (1491bp) protein (497aa)
Signal transduction histidine kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKC7_CHLTF
Signal transduction histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Signal transduction histidine kinase
13_1_20cm_2_scaffold_2711_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5502..5750
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPD4_9RHIZ
id=2868268 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein of unknown function (DUF1344)
13_1_20cm_2_scaffold_2711_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5784..6026
DNA (243bp) protein (81aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2711_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6082..6366)
DNA (285bp) protein (95aa)
Cyclase/dehydrase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D369_METSW
cyclase Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2711_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6465..7265)
DNA (801bp) protein (267aa)
alpha/beta hydrolase fold protein; K09023 aminoacrylate hydrolase [EC:3.5.1.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative hydrolase or acyltransferase RutD n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SCF4_9RHOB
hydrolase
13_1_20cm_2_scaffold_2711_11
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..7751)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036CC391
Uncharacterized protein {ECO:0000313|EMBL:CCJ48776.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertus
hypothetical protein
13_1_20cm_2_scaffold_2711_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7900..9864
DNA (1965bp) protein (655aa)
dehydratase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B39DB3 rbh
dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dehydratase
13_1_20cm_2_scaffold_2711_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9949..11979
DNA (2031bp) protein (677aa)
Oxidoreductase, molybdopterin-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKA9_9PROT
molybdopterin-binding oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
oxidoreductase, molybdopterin-binding protein
13_1_20cm_2_scaffold_2711_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11939..12898)
DNA (960bp) protein (320aa)
Putative ABC transporter permiase component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP91_AZOBR
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
putative ABC transporter permiase component
13_1_20cm_2_scaffold_2711_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12898..13767)
DNA (870bp) protein (290aa)
Branched-chain amino acid ABC transporter, membrane protein n=2 Tax=Geobacter sulfurreducens RepID=D7AKJ9_GEOSK
ABC transporter integral membrane subunit; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter membrane protein
13_1_20cm_2_scaffold_2711_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13769..14488)
DNA (720bp) protein (240aa)
ABC transporter related protein n=6 Tax=Geobacillus RepID=C9RUJ8_GEOSY
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter
13_1_20cm_2_scaffold_2711_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14472..15197)
DNA (726bp) protein (242aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTI0_ROSS1
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter-like protein
13_1_20cm_2_scaffold_2711_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15194..15355)
DNA (162bp) protein (54aa)
amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_2_scaffold_2711_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15352..16329)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H8Y3_9RHIZ
amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor
13_1_20cm_2_scaffold_2711_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16803..17066)
DNA (264bp) protein (88aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2711_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17400..18674)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD7_BRAJP
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
sugar ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_2711_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18858..20945
DNA (2088bp) protein (696aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NY90_9BRAD
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_1_20cm_2_scaffold_2711_23
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

20971..22104
DNA (1134bp) protein (378aa)
Putative amidohydrolase 2 protein n=2 Tax=Ralstonia solanacearum RepID=B5SFS4_RALSL
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative hydrolase
13_1_20cm_2_scaffold_2711_24
unknown

Not on your lists

22333..22410
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 24 items

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