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13_1_20cm_2_scaffold_4434

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4434_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(54..1355)
DNA (1302bp) protein (434aa)
putative L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable L-aspartate dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QPE9_9BRAD
putative L-aspartate dehydrogenase
13_1_20cm_2_scaffold_4434_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1768..3156
DNA (1389bp) protein (463aa)
RmuC-domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLY4_DESK7
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RmuC-domain-containing protein
13_1_20cm_2_scaffold_4434_3
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3163..5064)
DNA (1902bp) protein (634aa)
Glr3452 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFS2_GLOVI
hypothetical protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4434_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5105..5335
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML34_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4434_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5304..6545
DNA (1242bp) protein (414aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WWB0_KYRT2
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
13_1_20cm_2_scaffold_4434_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6545..7786
DNA (1242bp) protein (414aa)
Putative dioxygenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAB4_SINAD
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dioxygenase
13_1_20cm_2_scaffold_4434_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8025..8480
DNA (456bp) protein (152aa)
hypothetical protein; K09986 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_4434_8
unknown

Not on your lists

8500..8835
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_2_scaffold_4434_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8909..10585
DNA (1677bp) protein (559aa)
Benzoylformate decarboxylase (EC:4.1.1.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoylformate decarboxylase (EC:4.1.1.7)
thiamine pyrophosphate-binding protein n=1 Tax=Streptomyces sp. S4 RepID=UPI000249442A rbh
13_1_20cm_2_scaffold_4434_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10585..12201
DNA (1617bp) protein (539aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H8_SPHTD rbh
thiamine pyrophosphate-dependent protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiamine pyrophosphate protein TPP binding domain-containing protein
13_1_20cm_2_scaffold_4434_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12375..12935
DNA (561bp) protein (187aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KEP8_CHLTE
OmpA/MotB domain protein Tax=CSP1_6_Rokubacteria
peptidoglycan-associated lipoprotein
13_1_20cm_2_scaffold_4434_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12978..13763)
DNA (786bp) protein (262aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183, ECO:0000313|EMBL:CCC98163.1}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183, ECO:0000313|EMBL:CCC98163.1};; TaxID=1064539 species="Bacteria; Proteobac
Alanine dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALQ1_AZOBR
ald; alanine dehydrogenase
13_1_20cm_2_scaffold_4434_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14136..14942
DNA (807bp) protein (269aa)
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCI8_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC54186.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
putative short-chain dehydrogenase
13_1_20cm_2_scaffold_4434_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14985..15185)
DNA (201bp) protein (67aa)
Putative cold-shock DNA-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6Z5_ANADF
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cold-shock DNA-binding domain-containing protein
13_1_20cm_2_scaffold_4434_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15428..16564
DNA (1137bp) protein (379aa)
linoleoyl-CoA desaturase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46BB rbh
fatty acid desaturase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fatty acid desaturase
13_1_20cm_2_scaffold_4434_16
unknown

Not on your lists

16758..16973
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_4434_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16973..17185
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YUF3_9BACT
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=CSP1_6_Rokubacteria
rpsU; 30S ribosomal protein S21
13_1_20cm_2_scaffold_4434_18
unknown

Not on your lists

17178..17594
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_2_scaffold_4434_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17604..17876)
DNA (273bp) protein (91aa)
Peroxiredoxin n=3 Tax=Sulfolobus acidocaldarius RepID=M1IC82_9CREN
redoxin Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
peroxiredoxin
13_1_20cm_2_scaffold_4434_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17940..18149)
DNA (210bp) protein (70aa)
Antioxidant, AhpC/Tsa family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQW1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETW96974.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Peroxiredoxin
13_1_20cm_2_scaffold_4434_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18179..18361)
DNA (183bp) protein (61aa)
Putative Thiol-disulfide oxidoreductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAZ6_9BACT
resA; thiol-disulfide oxidoreductase resA Tax=CSP1_6_Rokubacteria
putative thiol-disulfide oxidoreductase
Displaying 21 items

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