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13_1_20cm_2_scaffold_587

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_587_1
unknown

Not on your lists

comp(47..313)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_2_scaffold_587_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

488..1012
DNA (525bp) protein (175aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLU3_SYNLT
13_1_20cm_2_scaffold_587_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1005..1355
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_587_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1387..2235
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0Y1_HERA2
3-hydroxybutyryl-CoA dehydrogenase
13_1_20cm_2_scaffold_587_5
unknown

Not on your lists

2509..2772
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_587_6
unknown

Not on your lists

3238..3714
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_2_scaffold_587_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3873..5681)
DNA (1809bp) protein (603aa)
Peptidase M28 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA0_ANADF rbh
peptidase M28 Tax=CSP1_6_Rokubacteria
peptidase M28
13_1_20cm_2_scaffold_587_8
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


comp(5723..7483)
DNA (1761bp) protein (587aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=29290 species="Bacteria; Nitro
Arginine--tRNA ligase n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7DBJ9_9BACT rbh
arginyl-tRNA synthetase
13_1_20cm_2_scaffold_587_9
unknown

Not on your lists

7568..7774
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_587_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7760..8176)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_587_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8208..8474
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RNL5_RHORT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_587_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8765..9205
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN24_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_587_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9244..9561
DNA (318bp) protein (106aa)
Toluene tolerance family protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EA16_GEOLS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
toluene tolerance family protein
13_1_20cm_2_scaffold_587_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9583..9852
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHX6_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_587_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9970..10698
DNA (729bp) protein (243aa)
Putative transcriptional regulatory protein, GntR family with an UbiC transcription regulator-associated domain n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ63_BRASO
phophonate C-P lyase system transcriptional regulator PhnF, GntR family; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transcriptional regulator
13_1_20cm_2_scaffold_587_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10705..12795
DNA (2091bp) protein (697aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
N-methylhydantoinase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZWP1_9PSEU
hyuA; N-methylhydantoinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_587_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12792..14525
DNA (1734bp) protein (578aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=halophilic archaeon DL31 RepID=G2MNQ2_9ARCH
13_1_20cm_2_scaffold_587_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14522..15682
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1I5_FERPA
acyl-CoA dehydrogenase domain protein Tax=GWA2_Rokubacteria_70_23_curated
acyl-CoA dehydrogenase domain protein
13_1_20cm_2_scaffold_587_19
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15693..16256
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO82419.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
ankyrin
ankyrin alias=RBG9_25_140,RBG9_C00025G00140 id=1245344 tax=RBG9 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus
13_1_20cm_2_scaffold_587_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16312..16530)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_2_scaffold_587_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16856..17368
DNA (513bp) protein (171aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDL5_9FIRM
acetyl-CoA acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_587_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17504..18460
DNA (957bp) protein (319aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWA2_Rokubacteria_70_23_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN16_BRAJP
13_1_20cm_2_scaffold_587_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18457..18888
DNA (432bp) protein (144aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJH8_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_20cm_2_scaffold_587_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..19388
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037385B1
phosphoesterase Tax=RBG_16_Desulfobacca_60_12_curated
phosphodiesterase
13_1_20cm_2_scaffold_587_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19389..19769
DNA (381bp) protein (127aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Methylmalonyl-CoA mutase domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPT7_DESK7
cobalamin B12-binding domain-containing protein
13_1_20cm_2_scaffold_587_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19766..20545
DNA (780bp) protein (260aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1I7_FERPA
13_1_20cm_2_scaffold_587_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

20542..21303
DNA (762bp) protein (254aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase N-terminal domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FET9_9DELT
Displaying 27 items

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