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13_1_20cm_2_scaffold_563

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_563_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2..436
DNA (435bp) protein (145aa)
Citryl-CoA lyase {ECO:0000313|EMBL:CDI04965.1}; EC=4.1.3.34 {ECO:0000313|EMBL:CDI04965.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archae
Citryl-CoA lyase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQY6_9ARCH
citryl-CoA lyase
13_1_20cm_2_scaffold_563_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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381..1091
DNA (711bp) protein (237aa)
ribE; Riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase alpha chain n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQL6_9ARCH
riboflavin synthase subunit alpha Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_563_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1164..1844
DNA (681bp) protein (227aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K02858 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] Tax=CSP1_1_Thaumarchaeota
ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQW5_9ARCH rbh
13_1_20cm_2_scaffold_563_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1847..2257
DNA (411bp) protein (137aa)
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=CSP1_1_Thaumarchaeota
hypothetical protein n=2 Tax=cellular organisms RepID=UPI00037ECACD
6,7-dimethyl-8-ribityllumazine synthase
13_1_20cm_2_scaffold_563_5

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2259..2978
DNA (720bp) protein (240aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=1455950 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured ma
GTP cyclohydrolase III n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR18_9ARCH
GTP cyclohydrolase IIA
13_1_20cm_2_scaffold_563_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3079..4116
DNA (1038bp) protein (346aa)
Amidohydrolase family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0R8_9ARCH
amidohydrolase Tax=CSP1_1_Thaumarchaeota
amidohydrolase
13_1_20cm_2_scaffold_563_7

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4103..4753
DNA (651bp) protein (217aa)
Deaminase-reductase domain-containing protein (RIB7, arfC) {ECO:0000313|EMBL:AIF02568.1}; EC=1.1.1.302 {ECO:0000313|EMBL:AIF02568.1};; TaxID=1456023 species="Archaea; Thaumarchaeota; environmental sam
ribD; 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (EC:1.1.1.302)
Putative RibD C-terminal domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA70_9ARCH
13_1_20cm_2_scaffold_563_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4750..5259)
DNA (510bp) protein (170aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQW9_9ARCH
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
tfe; Transcription factor E
13_1_20cm_2_scaffold_563_9
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5284..5814)
DNA (531bp) protein (177aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=2 Tax=Nitrosopumilaceae RepID=K0B9F3_9ARCH
hypothetical protein
13_1_20cm_2_scaffold_563_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(5804..6931)
DNA (1128bp) protein (376aa)
GTP1/OBG protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR25_9ARCH
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thauma
GTP1/OBG protein
13_1_20cm_2_scaffold_563_11
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6958..8001)
DNA (1044bp) protein (348aa)
Phosphate uptake regulator, PhoU n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A622_NITMS
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:ABX13500.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (
phosphate uptake regulator PhoU
13_1_20cm_2_scaffold_563_12
uncultured marine crenarchaeote HF4000_APKG8D6, Nitrosopumilales, Thaumarchaeota, Archaea

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8101..8559
DNA (459bp) protein (153aa)
Putative PUA domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA75_9ARCH
Putative PUA domain protein {ECO:0000313|EMBL:ABZ09472.1}; TaxID=455602 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG
PUA domain-containing protein
13_1_20cm_2_scaffold_563_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8578..8919
DNA (342bp) protein (114aa)
Nascent polypeptide-associated complex protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV96_9ARCH
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
nac; Nascent polypeptide-associated complex protein
13_1_20cm_2_scaffold_563_14
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9021..9635
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUA2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06401.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_563_15

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9884..10120
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBC7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF20020.1}; TaxID=1456334 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_88_D06.;"
hypothetical protein
13_1_20cm_2_scaffold_563_16

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10138..10476
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA79_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07766.1}; TaxID=1456101 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_24_H04.;"
hypothetical protein
13_1_20cm_2_scaffold_563_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10473..11807
DNA (1335bp) protein (445aa)
UbiD family decarboxylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV19_9ARCH rbh
UbiD family decarboxylase Tax=CSP1_1_Thaumarchaeota
UbiD family decarboxylase
13_1_20cm_2_scaffold_563_18
uncultured marine crenarchaeote HF4000_APKG8D6, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11819..12745)
DNA (927bp) protein (309aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA87_9ARCH
13_1_20cm_2_scaffold_563_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12778..13236)
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYR1_9ARCH
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP94455.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candida
putative HTH-type transcriptional regulator LrpA
13_1_20cm_2_scaffold_563_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13314..14390)
DNA (1077bp) protein (359aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|RuleBase:RU004501}; EC=1.2.1.11 {ECO:0000256|RuleBase:RU004501};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" sourc
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR02_9ARCH rbh
asd; aspartate-semialdehyde dehydrogenase
13_1_20cm_2_scaffold_563_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14473..15552
DNA (1080bp) protein (360aa)
Aminotransferase class I and II n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A603_NITMS rbh
class I/II aminotransferase Tax=CSP1_1_Thaumarchaeota
class I/II aminotransferase
13_1_20cm_2_scaffold_563_22
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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15549..16394
DNA (846bp) protein (282aa)
Probable cobyric acid synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5V7_9ARCH
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumil
cobyrinic acid ac-diamide synthase
13_1_20cm_2_scaffold_563_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16391..17383
DNA (993bp) protein (331aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ET38_9ARCH
cobalamin biosynthesis protein CobD Tax=CSP1_1_Thaumarchaeota
cobD; putative cobalamin biosynthesis protein CobD
13_1_20cm_2_scaffold_563_24

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17376..18101
DNA (726bp) protein (242aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
Cobalamin synthase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLG1_9ARCH
cobalamin 5'-phosphate synthase
13_1_20cm_2_scaffold_563_25
uncultured marine crenarchaeote HF4000_APKG3J11, Nitrosopumilales, Thaumarchaeota, Archaea

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18098..18682
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V6_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08665.1}; TaxID=455587 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase
13_1_20cm_2_scaffold_563_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18665..18862)
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARM2_9ARCH
30S ribosomal protein S27E Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S27E
13_1_20cm_2_scaffold_563_27
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(18862..19140)
DNA (279bp) protein (93aa)
50S ribosomal protein L44E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR66_9ARCH
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ribosomal protein L44E
13_1_20cm_2_scaffold_563_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19208..20254
DNA (1047bp) protein (349aa)
ade; Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V8_9ARCH
adenine deaminase Tax=CSP1_1_Thaumarchaeota
Displaying 28 items

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