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13_1_20cm_2_scaffold_7071

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_7071_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3..830
DNA (828bp) protein (276aa)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVK6_9ARCH rbh
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=CSP1_1_Thaumarchaeota
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_20cm_2_scaffold_7071_2
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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817..1872
DNA (1056bp) protein (352aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244, ECO:0000313|EMBL:AJM92934.1}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244, ECO:00003
aroB; 3-dehydroquinate synthase (EC:1.4.1.24)
3-dehydroquinate synthase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=DHQS_NITMS rbh
13_1_20cm_2_scaffold_7071_3
unknown

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2121..2405
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_2_scaffold_7071_4
unknown

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2599..2739
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_2_scaffold_7071_5

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2894..3031
DNA (138bp) protein (46aa)
ammonia monooxygenase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000376E4F1
Ammonia monooxygenase/methane monooxygenase, subunit C (AmoC) {ECO:0000313|EMBL:AIF09046.1}; TaxID=1456129 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarc
amoC; Ammonia monooxygenase, subunit C
13_1_20cm_2_scaffold_7071_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3361..4206)
DNA (846bp) protein (282aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaera
Putative DNA methylase N-4/N-6 domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB54_NITGG
putative DNA methylase N-4/N-6 domain protein
13_1_20cm_2_scaffold_7071_7
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4335..4481)
DNA (147bp) protein (49aa)
DNA/RNA-binding protein Alba n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAC3_9ARCH
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
DNA/RNA-binding protein AlbA
13_1_20cm_2_scaffold_7071_8
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4450..4632)
DNA (183bp) protein (61aa)
DNA-binding protein n=1 Tax=Nitrosopumilus sp. SJ RepID=UPI00037804A2
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122, ECO:0000313|EMBL:AJM91859.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" sour
albA; DNA/RNA-binding protein Alba
13_1_20cm_2_scaffold_7071_9
unknown

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4788..5102
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_2_scaffold_7071_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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5118..5798
DNA (681bp) protein (227aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KI40_9ARCH
3-dehydroquinate dehydratase
13_1_20cm_2_scaffold_7071_11

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6186..7007
DNA (822bp) protein (274aa)
Shikimate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQJ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM24087.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
shikimate 5-dehydrogenase
13_1_20cm_2_scaffold_7071_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7010..7864
DNA (855bp) protein (285aa)
Shikimate kinase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3B16 RepID=B3T787_9ARCH rbh
shikimate kinase Tax=CSP1_1_Thaumarchaeota
shikimate kinase
13_1_20cm_2_scaffold_7071_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7854..9122
DNA (1269bp) protein (423aa)
Putative 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQQ6_9ARCH rbh
3-phosphoshikimate 1-carboxyvinyltransferase Tax=CSP1_1_Thaumarchaeota
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_2_scaffold_7071_14

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comp(9119..9526)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3U1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF15285.1}; TaxID=1456248 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_B05.;"
hypothetical protein
13_1_20cm_2_scaffold_7071_15
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9523..10344)
DNA (822bp) protein (274aa)
GCN5-related N-acetyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL25_9ARCH
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGG41924.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nit
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_7071_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10459..11556
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQN2_9ARCH rbh
13_1_20cm_2_scaffold_7071_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11560..12930
DNA (1371bp) protein (457aa)
class I/II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=CSP1_1_Thaumarchaeota
Aminotransferase class I and II n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A229_NITMS rbh
class I/II aminotransferase
13_1_20cm_2_scaffold_7071_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12927..13781
DNA (855bp) protein (285aa)
Prephenate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQI8_9ARCH
prephenate dehydrogenase Tax=CSP1_1_Thaumarchaeota
prephenate dehydrogenase
13_1_20cm_2_scaffold_7071_19
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13782..14186
DNA (405bp) protein (135aa)
NUDIX hydrolase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A227_NITMS
NUDIX hydrolase {ECO:0000313|EMBL:AJW71316.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
NUDIX hydrolase
13_1_20cm_2_scaffold_7071_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14169..15488)
DNA (1320bp) protein (440aa)
thiC; Phosphomethylpyrimidine synthase (EC:4.1.99.17)
Phosphomethylpyrimidine synthase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVJ6_9ARCH
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_7071_21
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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15556..16671
DNA (1116bp) protein (372aa)
Phosphomethylpyrimidine kinase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVJ3_9ARCH
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGP93295.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitr
Phosphomethylpyrimidine kinase
Displaying 21 items

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