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13_1_20cm_2_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_15_1
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(2..568)
DNA (567bp) protein (189aa)
Site-specific recombinase XerD n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH5_9ARCH
Site-specific recombinase XerD {ECO:0000313|EMBL:EMR73901.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
13_1_20cm_2_scaffold_15_2
unknown

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1003..1431
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_15_3
RBG_16_Archaea_50_20_curated, Archaea

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1475..3043
DNA (1569bp) protein (523aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_15_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(3054..3362)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYG9_HALMD
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Archaea_50_20_curated
rps10p; 30S ribosomal protein S10P
13_1_20cm_2_scaffold_15_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(3565..4878)
DNA (1314bp) protein (438aa)
Elongation factor 1-alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE8_NITGG
tuf; elongation factor 1-alpha Tax=RBG_16_Archaea_50_20_curated
tuf; elongation factor 1-alpha
13_1_20cm_2_scaffold_15_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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5057..6349
DNA (1293bp) protein (431aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3) Tax=RBG_16_Thaumarchaeota_49_8_curated
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glu/Leu/Phe/Val dehydrogenase, C terminal n=1 Tax=uncultured organism RepID=M1Q2T1_9ZZZZ
13_1_20cm_2_scaffold_15_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(6368..6796)
DNA (429bp) protein (143aa)
Bacterioferritin n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6H1_9BACT
ferritin; K03594 bacterioferritin Tax=CSP1_2_Dadabacteria
ferritin
13_1_20cm_2_scaffold_15_8
RBG_16_Archaea_50_20_curated, Archaea

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6887..7792
DNA (906bp) protein (302aa)
putative (S)-2,3-Di-O-farnesylgeranylglyceryl synthase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI000382AB40
4-hydroxybenzoate polyprenyltransferase
13_1_20cm_2_scaffold_15_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(7733..9052)
DNA (1320bp) protein (440aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_13_Bathyarchaeota_38_9_curated
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=uncultured archaeon RepID=D1JD30_9ARCH
3-hydroxy-3-methylglutaryl-coenzyme A reductase
13_1_20cm_2_scaffold_15_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9107..10135)
DNA (1029bp) protein (343aa)
mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYL2_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_15_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(10110..10958)
DNA (849bp) protein (283aa)
MEMO1 family protein Mfer_0894 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZG0_METFV
dioxygenase; K06990 Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_15_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10955..11629)
DNA (675bp) protein (225aa)
30S ribosomal protein S2 n=4 Tax=Methanobrevibacter RepID=RS2_METS3
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Archaea_50_20_curated
rps2P; 30S ribosomal protein S2
13_1_20cm_2_scaffold_15_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(11640..11864)
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit N n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B761_ACIHW
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
RNA polymerase subunit N
13_1_20cm_2_scaffold_15_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(11875..12285)
DNA (411bp) protein (137aa)
30S ribosomal protein S9 n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAD8_STAHD
rps9p; ribosomal protein S9P Rps9p; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S9
13_1_20cm_2_scaffold_15_15
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(12278..12739)
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YSQ5_THEON
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus
rpl13p; 50S ribosomal protein L13
13_1_20cm_2_scaffold_15_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(12736..13371)
DNA (636bp) protein (212aa)
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH
RNA polymerase insert
13_1_20cm_2_scaffold_15_17
RBG_16_Archaea_50_20_curated, Archaea

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13398..13724
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EHR4_PYRF1
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_15_18
unknown

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comp(14028..14570)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_20cm_2_scaffold_15_19
RBG_16_Archaea_50_20_curated, Archaea

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comp(14618..15307)
DNA (690bp) protein (230aa)
30S ribosomal protein S4 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ21_PYRSN
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S4
13_1_20cm_2_scaffold_15_20
RBG_16_Archaea_50_20_curated, Archaea

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comp(15316..15924)
DNA (609bp) protein (203aa)
30S ribosomal protein S13 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDW4_THEC1
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S13
13_1_20cm_2_scaffold_15_21
CG_Micra_05, Micraarchaeota, Archaea

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15982..16581
DNA (600bp) protein (200aa)
S-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=CG_Micra_05
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YF21_DICT6
S-adenosylmethionine decarboxylase
13_1_20cm_2_scaffold_15_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17562..18410
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E799E
Peptidase family M50/AN1-like Zinc finger {ECO:0000313|EMBL:AIF82922.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
Peptidase family M50/AN1-like Zinc finger
13_1_20cm_2_scaffold_15_23
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(18571..19356)
DNA (786bp) protein (262aa)
Probable tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01081}; Short=Psi5
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA
TruB; H/ACA RNA-protein complex component Cbf5p
13_1_20cm_2_scaffold_15_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(19708..20004)
DNA (297bp) protein (99aa)
50S ribosomal protein L14e n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U1Z7_THEAM
50S ribosomal protein L14e; K02875 large subunit ribosomal protein L14e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L14
13_1_20cm_2_scaffold_15_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(20050..20670)
DNA (621bp) protein (207aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_Bathyarchaeota_38_9_curated
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=KCY_AERPE
13_1_20cm_2_scaffold_15_26
RBG_16_Archaea_50_20_curated, Archaea

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comp(20876..21367)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_15_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(21462..22046)
DNA (585bp) protein (195aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Archaea_50_20_curated
adkA; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3T9E3_9CREN
13_1_20cm_2_scaffold_15_28
RBG_16_Archaea_50_20_curated, Archaea

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comp(22055..23422)
DNA (1368bp) protein (456aa)
Protein translocase subunit SecY n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G8_9ARCH
hypothetical protein; K10956 protein transport protein SEC61 subunit alpha Tax=RBG_16_Archaea_50_20_curated
preprotein translocase subunit SecY
13_1_20cm_2_scaffold_15_29
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(23558..23926)
DNA (369bp) protein (123aa)
50S ribosomal protein L15P n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL15_HYPBU
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylic
rpl15p; 50S ribosomal protein L15P
13_1_20cm_2_scaffold_15_30
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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24366..25220
DNA (855bp) protein (285aa)
Site-specific recombinase XerD n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH5_9ARCH
Site-specific recombinase XerD {ECO:0000313|EMBL:EMR73901.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
int1; hypothetical protein
Displaying items 1-30 of 63 in total

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