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13_1_20cm_2_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2_1
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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1..549
DNA (549bp) protein (183aa)
DNA repair protein RadA n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P9Q0_9ARCH
DNA repair protein RadA {ECO:0000313|EMBL:BAJ50661.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterra
DNA repair protein RadA
13_1_20cm_2_scaffold_2_2
RBG_16_Archaea_50_20_curated, Archaea

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574..1578
DNA (1005bp) protein (335aa)
RecA/RadA recombinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWL8_9EURY
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Rad51
13_1_20cm_2_scaffold_2_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1583..2458)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSL11 RepID=G4WVC2_9BACT
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_20cm_2_scaffold_2_4
RBG_16_Archaea_50_20_curated, Archaea

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2561..4888
DNA (2328bp) protein (776aa)
polB2; DNA polymerase B (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase elongation subunit (family B) (EC:2.7.7.7)
DNA polymerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKE2_NITGG
13_1_20cm_2_scaffold_2_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4928..5950)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKH1_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU58927.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_2_scaffold_2_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6097..6660
DNA (564bp) protein (188aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_2_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6726..7115)
DNA (390bp) protein (130aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NN13_9BACL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_2_scaffold_2_8
unknown

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comp(7321..7554)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_trna_1
unknown

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8027..8138
DNA (112bp)
transferRNA
13_1_20cm_2_scaffold_2_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8816..9385
DNA (570bp) protein (190aa)
tmk; dTMP kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVZ2_9ARCH
thymidylate kinase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_2_10
unknown

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comp(9404..9829)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_11
RBG_16_Archaea_50_20_curated, Archaea

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10346..10624
DNA (279bp) protein (93aa)
UPF0147 protein Ahos_0533 n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B6L1_ACIHW
hypothetical protein; K09721 hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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10702..11598
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q4L8_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU71987.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
13_1_20cm_2_scaffold_2_13
unknown

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11610..12122
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_14
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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12110..13072
DNA (963bp) protein (321aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDS6_ACIB4
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADD08156.1}; ATPase, AAA family, putative {ECO:0000313|EMBL:EDY35578.1}; TaxID=439481 species="Archaea; Euryarchaeota; Acidul
ATPase AAA
13_1_20cm_2_scaffold_2_15

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13080..14351
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGL0_PYRYC
Hypothetical conserved protein (Some members containing a von Willebrand factor type A (VWA) domain) {ECO:0000313|EMBL:AIE99359.1}; TaxID=1457850 species="Archaea; Euryarchaeota; environmental samples
hypothetical protein
13_1_20cm_2_scaffold_2_16
unknown

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14348..14959
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_17
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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15012..15326
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6R0_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47979.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_20cm_2_scaffold_2_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(15321..15677)
DNA (357bp) protein (119aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2P4_9ARCH
Sjogrens syndrome scleroderma autoantigen 1; K07143 UPF0148 protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15935..18160
DNA (2226bp) protein (742aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHV7_NITGG rbh
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AIF84648.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
AAA family ATPase, CDC48 subfamily
13_1_20cm_2_scaffold_2_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

19100..19429
DNA (330bp) protein (110aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036F1ABF
DNA-binding protein Tax=RBG_16_Archaea_50_20_curated
DNA-binding protein
13_1_20cm_2_scaffold_2_21
unknown

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19835..20110
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_22
unknown

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20155..20412
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_2_scaffold_2_trna_2
unknown

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20501..20585
DNA (85bp)
transferRNA
13_1_20cm_2_scaffold_2_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20619..21824)
DNA (1206bp) protein (402aa)
Divalent metal cation transporter MntH n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IE11_ALIAT
Divalent metal cation transporter MntH Tax=AR11
mntH; NRAMP family Mn2+/Fe2+ transporter
13_1_20cm_2_scaffold_2_24

Not on your lists

22103..22528
DNA (426bp) protein (142aa)
Putative iron (Metal) dependent repressor, DtxR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA8_NITGG
DtxR family iron dependent repressor {ECO:0000313|EMBL:AIF16319.1}; TaxID=1456267 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_73_E02.;"
putative iron (metal) dependent repressor, DtxR family
13_1_20cm_2_scaffold_2_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(23186..24415)
DNA (1230bp) protein (410aa)
Sodium/hydrogen exchanger n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4H8_9ARCH
sodium/hydrogen exchange Tax=RBG_16_Archaea_50_20_curated
sodium/hydrogen exchanger
13_1_20cm_2_scaffold_2_26
Nitrosopumilus sp. AR, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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24921..25121
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Nitrosopumilus sp. AR RepID=UPI00036B81F2
13_1_20cm_2_scaffold_2_27
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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25201..25683
DNA (483bp) protein (161aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S014_THEOJ
N-acetyltransferase GCN5 Tax=RBG_16_Chloroflexi_50_11_curated
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_2_28
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25768..27582)
DNA (1815bp) protein (605aa)
Glycosyl hydrolase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I5D3_9ACTO
Glycosyl hydrolase family 15 {ECO:0000313|EMBL:EYT82425.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
putative protein C4H3,03c
Displaying items 1-30 of 110 in total

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