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13_1_20cm_2_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_28_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


413..1906
DNA (1494bp) protein (498aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Archaea_50_20_curated
Methionine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
13_1_20cm_2_scaffold_28_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1896..2513
DNA (618bp) protein (206aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
php domain-containing protein
13_1_20cm_2_scaffold_28_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2632..3417)
DNA (786bp) protein (262aa)
Cell division protein FtsZ n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFB2_9EURY
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_1_20cm_2_scaffold_28_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3858..5411)
DNA (1554bp) protein (518aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RBG_16_Bathyarchaeota_48_13_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI
13_1_20cm_2_scaffold_28_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5417..6826)
DNA (1410bp) protein (470aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Archaea_50_20_curated
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G8_9ARCH
glycine dehydrogenase subunit alpha
13_1_20cm_2_scaffold_28_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

6880..7923
DNA (1044bp) protein (348aa)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glycosyl transferase, family 4
13_1_20cm_2_scaffold_28_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(8548..9552)
DNA (1005bp) protein (335aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=AR10
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F468D
hypothetical protein
13_1_20cm_2_scaffold_28_9
unknown

Not on your lists

comp(9704..10033)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_10
unknown

Not on your lists

comp(10265..10375)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

10908..11417
DNA (510bp) protein (170aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_28_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11438..12679
DNA (1242bp) protein (414aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_28_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(13130..13870)
DNA (741bp) protein (247aa)
putative uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase superfamily protein n=1 Tax=mine drainage metagenome RepID=T1BFR3_9ZZZZ
uracil-DNA glycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_20cm_2_scaffold_28_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13843..14859)
DNA (1017bp) protein (339aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_28_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

15067..16002
DNA (936bp) protein (312aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_28_16
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16009..16740)
DNA (732bp) protein (244aa)
Putative Thiosulfate sulfurtransferase (Rhodanese-like protein) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYU7_POLGS
rhodanese domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
thiosulfate sulfurtransferase
13_1_20cm_2_scaffold_28_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16823..17458)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N446_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_28_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17722..18525
DNA (804bp) protein (268aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Thioredoxin reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKB8_9CHLR
thioredoxin reductase
13_1_20cm_2_scaffold_28_19
unknown

Not on your lists

18543..18746
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_20
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18751..19926)
DNA (1176bp) protein (392aa)
Resistance protein NorA n=1 Tax=Ferroplasma sp. Type II RepID=T0NI81_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC16058.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
major facilitator superfamily transporter
13_1_20cm_2_scaffold_28_21
unknown

Not on your lists

comp(20111..20446)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20752..22422)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003783E79
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_28_23
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22419..23204)
DNA (786bp) protein (262aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7G5_METCZ
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AFD00831.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
multidrug ABC transporter ATPase
13_1_20cm_2_scaffold_28_24
unknown

Not on your lists

comp(23286..24827)
DNA (1542bp) protein (514aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_25
unknown

Not on your lists

comp(24969..25097)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_2_scaffold_28_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(25153..25953)
DNA (801bp) protein (267aa)
asnA-2; L-asparagine amidohydrolase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RBG_16_Archaea_50_20_curated
Asparaginase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZK5_HERA2
asparaginase
13_1_20cm_2_scaffold_28_27
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26114..26776
DNA (663bp) protein (221aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZA4_DESAS
Sua5/YciO/YrdC/YwlC family protein
13_1_20cm_2_scaffold_28_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

26805..27332
DNA (528bp) protein (176aa)
Putative THUMP domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN99_NITGG
THUMP domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
THUMP domain-containing protein
13_1_20cm_2_scaffold_28_29
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(27329..27889)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RU85_METFO
hypothetical protein; K09119 hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_28_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(27873..28424)
DNA (552bp) protein (184aa)
Phosphoribosyltransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0W2_DICTD
purine phosphoribosyltransferase; K07101 Tax=RBG_16_Archaea_50_20_curated
phosphoribosyltransferase
Displaying items 1-30 of 42 in total

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