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13_1_20cm_2_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_55_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3..596)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8I13 RepID=B3TAZ3_9ARCH
Ser/Thr protein kinase Tax=CSP1_1_Thaumarchaeota
Ser/Thr protein kinase
13_1_20cm_2_scaffold_55_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(575..1993)
DNA (1419bp) protein (473aa)
cca; CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=RBG_13_Bathyarchaeota_46_16b_curated
CCA-adding enzyme (EC:2.7.7.72)
tRNA adenylyltransferase (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TWP9_9ARCH
13_1_20cm_2_scaffold_55_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2046..2540)
DNA (495bp) protein (165aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
ligT; 2'-5' RNA ligase (EC:6.5.1.-)
UPF0097 protein APE_1792 n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Y1792_AERPE
13_1_20cm_2_scaffold_55_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2691..3260
DNA (570bp) protein (190aa)
Dephospho-CoA kinase, CoaE n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUJ5_9ARCH
dephospho-CoA kinase, CoaE Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_55_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3389..3664
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI000362FC74
hypothetical protein; K09736 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_55_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3679..4599)
DNA (921bp) protein (307aa)
Ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BL2_METBF
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_55_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4599..5663)
DNA (1065bp) protein (355aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA (guanine(10)-N2)-dimethyltransferase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=TMG10_METTH
methyltransferase-like protein
13_1_20cm_2_scaffold_55_8
RBG_16_Archaea_50_20_curated, Archaea

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5794..6015
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00035C5B42
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L21
13_1_20cm_2_scaffold_55_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6015..6344
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
rpoF; DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000364BA4E
13_1_20cm_2_scaffold_55_10
RBG_16_Archaea_50_20_curated, Archaea

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6489..7073
DNA (585bp) protein (195aa)
DNA-binding protein n=2 Tax=Pyrococcus furiosus RepID=I6V3M6_9EURY
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
DNA-binding protein
13_1_20cm_2_scaffold_55_11
RBG_16_Archaea_50_20_curated, Archaea

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7078..7908
DNA (831bp) protein (277aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
dimethyladenosine transferase (EC:2.1.1.48)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7V7_METTP
13_1_20cm_2_scaffold_55_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8137..9024)
DNA (888bp) protein (296aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCW4_METIK rbh
succinyl-CoA synthetase subunit alpha
13_1_20cm_2_scaffold_55_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9028..10167)
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U2D8_THEAM
13_1_20cm_2_scaffold_55_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10804..11316
DNA (513bp) protein (171aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_1_20cm_2_scaffold_55_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

11324..12523
DNA (1200bp) protein (400aa)
Geranylgeranyl diphosphate reductase (EC:1.3.1.83)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS4_9BACT
digeranylgeranylglycerophospholipid reductase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_55_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

12600..13736
DNA (1137bp) protein (379aa)
Saccharopine dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUP2_9BACT
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Saccharopine dehydrogenase-like protein
13_1_20cm_2_scaffold_55_17
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14036..14803
DNA (768bp) protein (256aa)
Chromosome segregation ATPase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1A6_THEOJ
Chromosome segregation ATPase {ECO:0000313|EMBL:ADL08985.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermose
chromosome segregation ATPase
13_1_20cm_2_scaffold_55_18
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14917..15603)
DNA (687bp) protein (229aa)
Chromosome segregation ATPase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9R8_DESRM
Sporulation initiation inhibitor Soj {ECO:0000313|EMBL:KJS18165.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;
cobyrinic acid a,c-diamide synthase
13_1_20cm_2_scaffold_55_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16026..17696)
DNA (1671bp) protein (557aa)
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_55_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18170..18889)
DNA (720bp) protein (240aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_55_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18899..20149)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARD4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIC15617.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
hypothetical protein
13_1_20cm_2_scaffold_55_22
unknown

Not on your lists

20221..20496
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_55_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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20812..21423
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_20cm_2_scaffold_55_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(21629..22078)
DNA (450bp) protein (150aa)
phosphate uptake regulator PhoU Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_55_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(22036..22626)
DNA (591bp) protein (197aa)
Phosphate uptake regulator n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C835_9CREN
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator PhoU
13_1_20cm_2_scaffold_55_26
unknown

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22719..22922
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_55_27

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comp(22852..24141)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003756D61
Marine sediment metagenome DNA, contig: S12H4_S02642 {ECO:0000313|EMBL:GAI98038.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_55_28
unknown

Not on your lists

comp(24142..24387)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_2_scaffold_55_29
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(25090..25422)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
Thioredoxin
13_1_20cm_2_scaffold_55_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(25677..25928)
DNA (252bp) protein (84aa)
Tax=RBG_16_Archaea_50_20_curated
Displaying items 1-30 of 87 in total

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