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13_1_20cm_2_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_58_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..576
DNA (576bp) protein (192aa)
Glycoside hydrolase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N634_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:EMA52569.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
chitinase
13_1_20cm_2_scaffold_58_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

616..1617
DNA (1002bp) protein (334aa)
UPI0003CEB07B related cluster n=1 Tax=unknown RepID=UPI0003CEB07B
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_58_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1625..3103
DNA (1479bp) protein (493aa)
peptide transporter n=1 Tax=Thermococcus zilligii RepID=UPI00029A09FD
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-type dipeptide/oligopeptide transport system permease
13_1_20cm_2_scaffold_58_4
unknown

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3137..4099
DNA (963bp) protein (321aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4169..5134
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP60_STAMF
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_2_scaffold_58_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5131..6147
DNA (1017bp) protein (339aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAI9_ACIB4
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
peptide ABC transporter ATPase
13_1_20cm_2_scaffold_58_7
unknown

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comp(6294..6959)
DNA (666bp) protein (222aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_8
unknown

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7116..8042
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_9
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8176..10224
DNA (2049bp) protein (683aa)
FG-GAP repeat protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LR87_9CHRO
FG-GAP repeat protein {ECO:0000313|EMBL:ELR99332.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
FG-GAP repeat-containing protein
13_1_20cm_2_scaffold_58_10
unknown

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comp(10241..10375)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_11

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10446..13028
DNA (2583bp) protein (861aa)
Marine sediment metagenome DNA, contig: S01H1_S20313 {ECO:0000313|EMBL:GAG15135.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
family 5 extracellular solute-binding protein
13_1_20cm_2_scaffold_58_12
unknown

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13169..13642
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(14831..15592)
DNA (762bp) protein (254aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_1_20cm_2_scaffold_58_14
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

15705..16856
DNA (1152bp) protein (384aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G0_9ARCH
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:ACF09884.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine c
Mrp protein
13_1_20cm_2_scaffold_58_15
unknown

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17070..17402
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(18079..18492)
DNA (414bp) protein (138aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_58_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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19459..19764
DNA (306bp) protein (102aa)
DUF59 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
putative metal-sulfur cluster biosynthetic enzyme
13_1_20cm_2_scaffold_58_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

20233..22089
DNA (1857bp) protein (619aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_Archaea_50_20_curated
2:oxoacid-ferredoxin oxidoreductase, fused alpha and gamma subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5D9CE rbh
13_1_20cm_2_scaffold_58_19
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

22082..23011
DNA (930bp) protein (310aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAJ48840.1}; EC=1.2.7.3 {ECO:0000313|EMBL:BAJ48840.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeo
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N971_9ARCH
13_1_20cm_2_scaffold_58_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(23031..23885)
DNA (855bp) protein (285aa)
NAD+ synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
NH(3)-dependent NAD(+) synthetase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T6A5_9EURY
NAD+ synthetase
13_1_20cm_2_scaffold_58_21
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(23926..25185)
DNA (1260bp) protein (420aa)
Proteasome-activating nucleotidase n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PAN_PYRAB
Proteasome-activating nucleotidase {ECO:0000255|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000255|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000255|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
proteasome-activating nucleotidase
13_1_20cm_2_scaffold_58_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(25331..25885)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJC3_THEBM
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_58_23
RBG_16_Archaea_50_20_curated, Archaea

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26288..26578
DNA (291bp) protein (97aa)
Putative AsnC family transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM31_9BACT
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
AsnC family transcriptional regulator
13_1_20cm_2_scaffold_58_24
unknown

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comp(26752..26952)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_25
unknown

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comp(27014..28093)
DNA (1080bp) protein (360aa)

This feature has no annotations

13_1_20cm_2_scaffold_58_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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28868..30325
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
aldehyde dehydrogenase
13_1_20cm_2_scaffold_58_27
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(30349..30762)
DNA (414bp) protein (138aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP51_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_13_Chloroflexi_46_14_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_20cm_2_scaffold_58_28
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(30765..31667)
DNA (903bp) protein (301aa)
Putative uncharacterized protein PH0309 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58047_PYRHO
Putative uncharacterized protein PH0309 {ECO:0000313|EMBL:BAA29382.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
hypothetical protein
13_1_20cm_2_scaffold_58_29
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31734..32888)
DNA (1155bp) protein (385aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C6E3_DESTA rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFM25134.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomon
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_58_30
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(32949..33260)
DNA (312bp) protein (104aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9G8_9BACI
ethyl tert-butyl ether degradation EthD Tax=RBG_16_Chloroflexi_56_8_curated
ethyl tert-butyl ether degradation protein EthD
Displaying items 1-30 of 33 in total

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