ggKbase home page

13_1_20cm_2_scaffold_786_27

Organism: 13_1_20CM_2_Crenarchaeota_53_14

partial RP 32 / 55 MC: 4 BSCG 12 / 51 ASCG 23 / 38 MC: 2
Location: comp(23247..24251)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 295.0
  • Bit_score: 402
  • Evalue 3.70e-109
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 303.0
  • Bit_score: 482
  • Evalue 6.80e-133
Transcription initiation factor IIB (TFIIB) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 293.0
  • Bit_score: 351
  • Evalue 3.60e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bathyarchaeota_38_9_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 1005
TTGGGTGCGACACAGTACACCAGGTTCGACGCTCTAACCGAGGCTCGGGAAAGCTGGAGAGCGAACCTCACGACCACGCCATCAATTCCTGGGAGAAACCCTTCGAGAATTCACGTTTGCCCGGAATGTGGTAGTGTAAATCTCATTGAAGATTTCGATCAAGGGGAGACTATCTGTCAAGACTGTGGGCTCGTGCTGTCTCAGAATCTGATGAGTCGCGGGCCAGAGTGGCGTGCCTTCACAAAGGAGGAGAAGGACGAGAGAGGACGCGTAGGTATACCCACCTCCTTCTCTATTCACGACAAAGGTCTCTCCACGGTCATAGACCGGGTCAATAGGGACGCGTTCGGCCGACAGCTTCCGATGGAGACAAGGATGGAGATGCTGCGGCTTCGCAAGTGGCAAATCCGTACTCGAGTACACTCATCGTCTGACAGAAATCTGGCGCAAGCCATGGCGGAACTGGATCGCCTCACAGACAAGCTTCACGTGCCCGCCAATGTGAAGGAGAGTTCAGCCGTGGTGTACCGGAAAGCCTTGGATAACGGACTAGTTCGCGGCAGATCAATCGCCGCCATTGCTGCGGCGTCTCTCTACGCTGCCTGCAGATCGTCTGAAACCCCTCGGACCCTAAAGGAGGTAGCTGCCGCAAGTAGAATCAAGAAGAAGGATGTAGCTAGATGCTACAGGCTGCTTCTGCGAGAACTCGAGATGGCGATGCCTGTGGAAGATCCAATTAGGTGCATTTCGAAGATCGCGAGTAGGGCTGAAATTTCAATACAGACTCAACAATCAGCGATCAGAGTCTTGAAAGATGCGAGGAAGAAGGGGGTGGTCGCGGGTAAAGACCCGATGGGTCTGGCCGCGGCCGCGCTGTACGTCGCTTGCGTTCTAGAGAATGAGAAGAAGACTCAGAAGGAAATCGCTGAAATAGCAAATGTAACTGAGGTCACAGTGCGAAATAGGTACAAGGGCCTAAAGGATTCCCTTGGACTTCAAGCCTAA
PROTEIN sequence
Length: 335
LGATQYTRFDALTEARESWRANLTTTPSIPGRNPSRIHVCPECGSVNLIEDFDQGETICQDCGLVLSQNLMSRGPEWRAFTKEEKDERGRVGIPTSFSIHDKGLSTVIDRVNRDAFGRQLPMETRMEMLRLRKWQIRTRVHSSSDRNLAQAMAELDRLTDKLHVPANVKESSAVVYRKALDNGLVRGRSIAAIAAASLYAACRSSETPRTLKEVAAASRIKKKDVARCYRLLLRELEMAMPVEDPIRCISKIASRAEISIQTQQSAIRVLKDARKKGVVAGKDPMGLAAAALYVACVLENEKKTQKEIAEIANVTEVTVRNRYKGLKDSLGLQA*