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13_1_20cm_2_scaffold_786

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_786_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3..602)
DNA (600bp) protein (200aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6A4_9ARCH
13_1_20cm_2_scaffold_786_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(631..1224)
DNA (594bp) protein (198aa)
KH domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR4_METFV
kh domain protein; K06961 ribosomal RNA assembly protein Tax=RBG_16_Archaea_50_20_curated
kh domain-containing protein
13_1_20cm_2_scaffold_786_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1221..2003)
DNA (783bp) protein (261aa)
putative serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] Tax=RBG_16_Archaea_50_20_curated
RIO kinase 1 (EC:2.7.11.1)
RIO kinase 1 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4A3_9ARCH
13_1_20cm_2_scaffold_786_4

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comp(2028..2744)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035E6B30
Uncharacterized protein {ECO:0000313|EMBL:KKM59464.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter
13_1_20cm_2_scaffold_786_5
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

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comp(2756..3550)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI00036F454C
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ACB07546.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofi
branched-chain amino acid ABC transporter ATPase
13_1_20cm_2_scaffold_786_6
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(3605..5047)
DNA (1443bp) protein (481aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Sulfolobus islandicus RepID=UPI00036336D7
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACP39181.1}; Flags: Precursor;; TaxID=427317 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="S
extracellular ligand-binding receptor
13_1_20cm_2_scaffold_786_7
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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5156..6268
DNA (1113bp) protein (371aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NBE6_9ARCH
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:BAJ49652.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candid
branched-chain amino acid ABC transporter permease
13_1_20cm_2_scaffold_786_8

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6269..7423
DNA (1155bp) protein (385aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7L9_KORCO
Uncharacterized protein {ECO:0000313|EMBL:KKL72215.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
branched-chain amino acid ABC transporter permease
13_1_20cm_2_scaffold_786_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7483..7740)
DNA (258bp) protein (86aa)
Uncharacterized protein family UPF0434/Trm112 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_786_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(7806..8759)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI000362A8E6
dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
dehydrogenase
13_1_20cm_2_scaffold_786_11
unknown

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comp(8756..10063)
DNA (1308bp) protein (436aa)

This feature has no annotations

13_1_20cm_2_scaffold_786_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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10237..11403
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_786_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(11926..12822)
DNA (897bp) protein (299aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
phosphoglucosamine mutase
13_1_20cm_2_scaffold_786_14
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(12762..13217)
DNA (456bp) protein (152aa)
bifunctional phosphomannomutase/phosphoglucomutase (EC:5.4.2.8) Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
Phosphomannomutase related protein n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HKM9_THEAC
phosphoglucosamine mutase
13_1_20cm_2_scaffold_786_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(13254..14297)
DNA (1044bp) protein (348aa)
Gcd1.2; nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Archaea_50_20_curated
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MC98_CALMQ
nucleotidyl transferase
13_1_20cm_2_scaffold_786_16
unknown

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14413..15012
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_2_scaffold_786_17
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(15096..15710)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C136_9CREN
Uncharacterized protein {ECO:0000313|EMBL:EHP71132.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis
hypothetical protein
13_1_20cm_2_scaffold_786_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

16277..17056
DNA (780bp) protein (260aa)
Putative GHMP kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase Tax=RBG_13_Bathyarchaeota_46_16b_curated
GHMP kinase
13_1_20cm_2_scaffold_786_19
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

17131..17811
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QUY7_VULDI
Uncharacterized protein {ECO:0000313|EMBL:ADN49990.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
hypothetical protein
13_1_20cm_2_scaffold_786_20
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

17796..18677
DNA (882bp) protein (294aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_13_Chloroflexi_48_10_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9H9_AMMDK
13_1_20cm_2_scaffold_786_21
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18682..19605
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae;
2-dehydropantoate 2-reductase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC11_HELMI
panE; 2-dehydropantoate 2-reductase
13_1_20cm_2_scaffold_786_22
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(19731..19991)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
Uncharacterized protein {ECO:0000313|EMBL:ABL77742.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain H
hypothetical protein
13_1_20cm_2_scaffold_786_23
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

20483..21076
DNA (594bp) protein (198aa)
Nucleotidyl transferase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSY6_VULDI
nucleotidyl transferase Tax=RIFOXYD1_FULL_OD1_48_21_curated
nucleotidyl transferase
13_1_20cm_2_scaffold_786_24
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

21073..22032
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UAI1_FERPD
nucleoside-diphosphate-sugar epimerase
13_1_20cm_2_scaffold_786_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(22263..22571)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_20cm_2_scaffold_786_26
unknown

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22987..23235
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_2_scaffold_786_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23247..24251)
DNA (1005bp) protein (335aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
Transcription initiation factor IIB (TFIIB)
13_1_20cm_2_scaffold_786_trna_1
unknown

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24380..24521
DNA (142bp)
transferRNA
13_1_20cm_2_scaffold_786_28
unknown

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comp(24577..25074)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_2_scaffold_786_29
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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25220..25798
DNA (579bp) protein (193aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
cytidyltransferase (EC:2.7.7.3)
Cytidyltransferase-related domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWL3_METFV
Displaying items 1-30 of 31 in total

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