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13_1_20cm_2_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_235_1
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(2..1087)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQD6_NOCSJ
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_20cm_2_scaffold_235_2
unknown

Not on your lists

comp(1195..1344)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1605..2228)
DNA (624bp) protein (208aa)
Putative ScpB Prokaryotic chromosome segregation and condensation protein-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBM2_9EURY
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RBG_16_Archaea_50_20_curated
ScpB Prokaryotic chromosome segregation and condensation protein-like protein
13_1_20cm_2_scaffold_235_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2197..2883)
DNA (687bp) protein (229aa)
Condensin subunit ScpA n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Archaea_50_20_curated
segregation and condensation protein A
13_1_20cm_2_scaffold_235_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2880..4337)
DNA (1458bp) protein (486aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
chromosome segregation ATPase
13_1_20cm_2_scaffold_235_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4384..6363)
DNA (1980bp) protein (660aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
SMC domain-containing protein
13_1_20cm_2_scaffold_235_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6447..7217)
DNA (771bp) protein (257aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Archaea_50_20_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003793FA5
13_1_20cm_2_scaffold_235_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(7222..8034)
DNA (813bp) protein (271aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=MTIP_METTH
methylthioadenosine phosphorylase
13_1_20cm_2_scaffold_235_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8031..8843)
DNA (813bp) protein (271aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036BCEBC
phosphoserine phosphatase
13_1_20cm_2_scaffold_235_10
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8930..9601
DNA (672bp) protein (224aa)
Pheromone shutdown protein (TraB) n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZP3_PYRAB
Pheromone shutdown protein (TraB) {ECO:0000313|EMBL:CCE70515.1}; Signaling protein {ECO:0000313|EMBL:CAB50013.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococca
signaling protein
13_1_20cm_2_scaffold_235_11
unknown

Not on your lists

9753..9968
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10210..11520)
DNA (1311bp) protein (437aa)
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_235_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11669..12226)
DNA (558bp) protein (186aa)
Putative transcriptional regulator with C-terminal CBS domain n=2 Tax=Candidatus Methanomethylophilus RepID=M9SI13_9EURY
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
putative transcriptional regulator with C-terminal CBS domains
13_1_20cm_2_scaffold_235_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

12342..13334
DNA (993bp) protein (331aa)
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI000380FB7E
cobalamin-independent synthase MetE-like protein Tax=CSP1_3_Armatimonadetes
Cobalamin-independent synthase MetE domain-containing protein
13_1_20cm_2_scaffold_235_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13334..14539
DNA (1206bp) protein (402aa)
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Archaea_50_20_curated
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS0_RUBXD
13_1_20cm_2_scaffold_235_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

14599..15441
DNA (843bp) protein (281aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinac
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YW24_9BACT
13_1_20cm_2_scaffold_235_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15670..16872)
DNA (1203bp) protein (401aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RBG_13_Bathyarchaeota_46_16b_curated
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F62FC
13_1_20cm_2_scaffold_235_18
unknown

Not on your lists

16975..17112
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_19
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

17202..18248
DNA (1047bp) protein (349aa)
L-threonine 3-dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q7_9BACI
L-threonine 3-dehydrogenase Tax=CG_Micra_04
L-threonine 3-dehydrogenase
13_1_20cm_2_scaffold_235_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18748..19422)
DNA (675bp) protein (225aa)
O-methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP05_SORCE rbh
O-methyltransferase {ECO:0000313|EMBL:AGP32378.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellu
O-methyltransferase
13_1_20cm_2_scaffold_235_21
unknown

Not on your lists

comp(19430..19618)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19775..20173)
DNA (399bp) protein (133aa)
30S ribosomal protein S8e n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T4T0_9ARCH
30S ribosomal protein S8e; K02995 small subunit ribosomal protein S8e Tax=RBG_16_Bathyarchaeota_48_13_curated
rps8e; 30S ribosomal protein S8e
13_1_20cm_2_scaffold_235_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

20311..20523
DNA (213bp) protein (71aa)
Marine sediment metagenome DNA, contig: S01H1_S32854 Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_235_24
unknown

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comp(20599..22020)
DNA (1422bp) protein (474aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

22225..22863
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YK26_9EURY
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
archaeal conserved hypothetical protein
13_1_20cm_2_scaffold_235_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

22900..23700
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00036AC969
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_235_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23701..24597)
DNA (897bp) protein (299aa)
PREDICTED: serine racemase-like isoform X3 n=1 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AHG92280.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_2_scaffold_235_28
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24667..25263
DNA (597bp) protein (199aa)
coenzyme F420-dependent NADP oxidoreductase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624F3A
hypothetical protein; K06988 Tax=RBG_16_Deltaproteobacteria_71_12_curated
RSp1147; transmemembrane reductasease oxidoreductase
13_1_20cm_2_scaffold_235_29
unknown

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comp(25644..25790)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_2_scaffold_235_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

25924..26304
DNA (381bp) protein (127aa)
Translation initiation inhibitor, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF38_PYRYC
hypothetical protein; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
endoribonuclease
Displaying items 1-30 of 39 in total

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