ggKbase home page

13_1_20cm_2_scaffold_809

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_809_1
unknown

Not on your lists

323..1006
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_2
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

comp(1565..1789)
DNA (225bp) protein (75aa)
Signal transduction histidine kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T149_9CYAN
signal transduction histidine kinase Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
signal transduction histidine kinase
13_1_20cm_2_scaffold_809_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2100..2417
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG64_ANADE alias=16ft_combo_ws3_scaffold_19372_15 id=5224350 tax=16ft_combo_ws3 species=Anaeromyxobacter dehalogenans (strain 2CP-C) genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EWY37792.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
isoprenylcysteine carboxyl methyltransferase
13_1_20cm_2_scaffold_809_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2533..3417
DNA (885bp) protein (295aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RBP3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF19160.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
methylase
13_1_20cm_2_scaffold_809_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

3421..4422
DNA (1002bp) protein (334aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_809_6
unknown

Not on your lists

comp(4419..4898)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4970..5542
DNA (573bp) protein (191aa)
cupin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B64BBA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
cupin 2 barrel domain-containing protein
13_1_20cm_2_scaffold_809_8
unknown

Not on your lists

5868..6725
DNA (858bp) protein (286aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_9
unknown

Not on your lists

7471..7869
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_10
unknown

Not on your lists

comp(8265..8471)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_11
unknown

Not on your lists

8824..9138
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_12

Not on your lists

9220..10887
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP72_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKL49159.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_809_13
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

10895..11824
DNA (930bp) protein (310aa)
SAM-dependent methyltransferase (EC:2.1.1.-) Tax=RIFOXYC12_FULL_TA06_54_24_curated
SAM-dependent methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase alias=gwe2_scaffold_243_24 id=1908973 tax=TA06 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes
13_1_20cm_2_scaffold_809_14
unknown

Not on your lists

12014..12277
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_15
unknown

Not on your lists

12278..12637
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_16
unknown

Not on your lists

12634..12957
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_17
unknown

Not on your lists

comp(12954..13799)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_20cm_2_scaffold_809_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14022..14480)
DNA (459bp) protein (153aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_809_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14496..15449)
DNA (954bp) protein (318aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_20cm_2_scaffold_809_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15462..15602)
DNA (141bp) protein (47aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_809_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15864..17339)
DNA (1476bp) protein (492aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
tRNA-splicing ligase RtcB n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCV4_9CREN
tRNA-splicing ligase RtcB
13_1_20cm_2_scaffold_809_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(17441..17884)
DNA (444bp) protein (148aa)
Putative archease protein family (DUF101/UPF0211) n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA3_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_809_trna_1
unknown

Not on your lists

18036..18124
DNA (89bp)
transferRNA
13_1_20cm_2_scaffold_809_23
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(18514..19224)
DNA (711bp) protein (237aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ACP34844.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ACP34844.1};; EC=4.2.1.17 {ECO:0000313|EMBL:ACP34844.1};; TaxID=429572 species="Archaea; Crena
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) RepID=C4KFV3_SULIK
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_2_scaffold_809_24
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

19348..20205
DNA (858bp) protein (286aa)
HD domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SKY9_9BACT
HD domain protein {ECO:0000313|EMBL:BAL56825.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_809_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20267..20554)
DNA (288bp) protein (96aa)
Putative nucleic acid binding OB-fold tRNA/helicase-type n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH57_NITGG
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_13_Bathyarchaeota_38_9_curated
OB-fold nucleic acid binding protein
13_1_20cm_2_scaffold_809_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(20541..20732)
DNA (192bp) protein (64aa)
deoxyribonuclease/rho motif-related TRAM Tax=CG_Aenigma_01
deoxyribonuclease/rho motif-related TRAM
deoxyribonuclease/rho motif-related TRAM alias=gwa2_scaffold_672_105 id=5044793 tax=GW2011_AR10 species=Methanocaldococcus infernus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
13_1_20cm_2_scaffold_809_27
unknown

Not on your lists

comp(20744..20887)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 28 items

View Taxonomy