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13_1_20cm_2_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_117_1
unknown

Not on your lists

comp(476..931)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(936..1538)
DNA (603bp) protein (201aa)
Recombinase RecA n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZRG9_THELI
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72654.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoper
hypothetical protein
13_1_20cm_2_scaffold_117_3
unknown

Not on your lists

comp(1585..1785)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_4
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1736..2533)
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V2V8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AAL80226.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATC
hypothetical protein
13_1_20cm_2_scaffold_117_5

Not on your lists


2750..3217
DNA (468bp) protein (156aa)
50S ribosomal protein L22P n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAY8_9ARCH
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L22P
13_1_20cm_2_scaffold_117_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


3218..3844
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003619861
rps3p; ribosomal protein S3P Rps3p Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S3
13_1_20cm_2_scaffold_117_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

4038..4319
DNA (282bp) protein (94aa)
rnp1; ribonuclease P, component 1 (EC:3.1.26.5); K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=CG_Aenigma_01
rnp1; ribonuclease P, component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=RNP1_METST
13_1_20cm_2_scaffold_117_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists


4313..4648
DNA (336bp) protein (112aa)
30S ribosomal protein S17P n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RS17_UNCMA
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Bathyarchaeota_48_13_curated
rps17p; 30S ribosomal protein S17P
13_1_20cm_2_scaffold_117_9
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4608..5351)
DNA (744bp) protein (248aa)
Putative uncharacterized protein ORF-c10_023 n=1 Tax=Sulfolobus solfataricus RepID=Q9UX96_SULSF
Putative uncharacterized protein ORF-c10_023 {ECO:0000313|EMBL:CAB57596.1}; TaxID=2287 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus solf
13_1_20cm_2_scaffold_117_10
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


5728..6216
DNA (489bp) protein (163aa)
30S ribosomal protein S4e n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=RS4E_IGNH4
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospita
30S ribosomal protein S4
13_1_20cm_2_scaffold_117_11

Not on your lists


6218..6757
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BMD2_HYPBU
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl5p; 50S ribosomal protein L5P
13_1_20cm_2_scaffold_117_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


6955..7320
DNA (366bp) protein (122aa)
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8P
13_1_20cm_2_scaffold_117_13

Not on your lists


7334..7906
DNA (573bp) protein (191aa)
50S ribosomal protein L6 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=RL6_STAMF
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
13_1_20cm_2_scaffold_117_14
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

7912..8394
DNA (483bp) protein (161aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L315_THEU7
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzon
50S ribosomal protein L32e
13_1_20cm_2_scaffold_117_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8391..8819
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothe
50S ribosomal protein L19e
13_1_20cm_2_scaffold_117_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


8823..9422
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQR0_VULDI
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L18
13_1_20cm_2_scaffold_117_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists


9452..10051
DNA (600bp) protein (200aa)
30S ribosomal protein S5 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Bathyarchaeota_48_13_curated
30S ribosomal protein S5
13_1_20cm_2_scaffold_117_18
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


10053..10544
DNA (492bp) protein (164aa)
50S ribosomal protein L30P n=1 Tax=Thermofilum sp. 1910b RepID=S5Z672_9CREN
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;
hypothetical protein
13_1_20cm_2_scaffold_117_19
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

10680..11132
DNA (453bp) protein (151aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
Small heat shock protein HSP20 {ECO:0000313|EMBL:AFL66857.1}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
small heat shock protein HSP20
13_1_20cm_2_scaffold_117_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11468..12121)
DNA (654bp) protein (218aa)
HTH DNA binding domain n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSP1_METMJ
Putative DNA binding protein {ECO:0000313|EMBL:AIF84718.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus
putative DNA binding protein
13_1_20cm_2_scaffold_117_21
unknown

Not on your lists

12494..12973
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_22
unknown

Not on your lists

comp(13222..13383)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_23
unknown

Not on your lists

13536..14963
DNA (1428bp) protein (476aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_24
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

comp(15030..15395)
DNA (366bp) protein (122aa)
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96) Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase alias=gwa2_scaffold_134_76 id=5084595 tax=GWA2_OP11 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project
13_1_20cm_2_scaffold_117_25
unknown

Not on your lists

15527..16354
DNA (828bp) protein (276aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_26
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

16351..17454
DNA (1104bp) protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
group 1 glycosyl transferase
13_1_20cm_2_scaffold_117_27
Vulcanisaeta moutnovskia, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

17676..18221
DNA (546bp) protein (182aa)
Methyltransferase FkbM family n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QUT9_VULM7
Methyltransferase FkbM family {ECO:0000313|EMBL:ADY01921.1}; TaxID=985053 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta moutnov
FkbM family methyltransferase
13_1_20cm_2_scaffold_117_28
unknown

Not on your lists

18214..18906
DNA (693bp) protein (231aa)

This feature has no annotations

13_1_20cm_2_scaffold_117_29
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

19271..20260
DNA (990bp) protein (330aa)
hypothetical protein n=5 Tax=cellular organisms RepID=UPI00037542C4
methyltransferase Tax=GWB1_OP11_45_5_curated
C-methyltransferase
13_1_20cm_2_scaffold_117_30
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20257..20946
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00036DC0D5
Uncharacterized protein {ECO:0000313|EMBL:CDO59675.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
hypothetical protein
Displaying items 1-30 of 57 in total

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