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13_1_20cm_2_scaffold_1450

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1450_1
unknown

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comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_2_scaffold_1450_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(66..2270)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8D7_GEMAT
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AHG90641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA internalization-related competence protein ComEC/Rec2
13_1_20cm_2_scaffold_1450_3
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2285..2569)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KFB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44993.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
late competence development protein ComFB; K02241 competence protein ComFB
13_1_20cm_2_scaffold_1450_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2560..3885)
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8D6_GEMAT
(Dimethylallyl)adenosine tRNA methylthiotransferase miaB
13_1_20cm_2_scaffold_1450_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3888..5108)
DNA (1221bp) protein (407aa)
tRNA 2-methylthioadenosine synthase-like protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEU4_9BACT
tRNA 2-methylthioadenosine synthase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA 2-methylthioadenosine synthase-like protein
13_1_20cm_2_scaffold_1450_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5105..6205)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_1450_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6217..7518)
DNA (1302bp) protein (434aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_1450_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7518..7904)
DNA (387bp) protein (129aa)
cdd; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8D3_GEMAT
13_1_20cm_2_scaffold_1450_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7901..9076)
DNA (1176bp) protein (392aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
Phosphopentomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8D2_GEMAT
phosphopentomutase
13_1_20cm_2_scaffold_1450_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9073..10119)
DNA (1047bp) protein (349aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine racemase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=ALR_DEIGD
Alanine racemase
13_1_20cm_2_scaffold_1450_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10160..10888
DNA (729bp) protein (243aa)
Putative nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8D0_GEMAT
MazG family protein {ECO:0000313|EMBL:AHG90629.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MazG family protein
13_1_20cm_2_scaffold_1450_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10899..13385)
DNA (2487bp) protein (829aa)
Beta-hexosaminidase Hex {ECO:0000313|EMBL:ELX09730.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ELX09730.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteracea
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003801F88
beta-N-acetylhexosaminidase
13_1_20cm_2_scaffold_1450_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13385..15334)
DNA (1950bp) protein (650aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L4_GEMAT rbh
putative ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=GWC2_Gemmatimonadetes_71_10_curated
putative ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_1450_14
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(15421..16413)
DNA (993bp) protein (331aa)
Glycosyl hydrolase, family 88 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT35_KORVE rbh
Rhamnogalacturonides degradation protein RhiN {ECO:0000313|EMBL:AIE74679.1}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis s
Rhamnogalacturonides degradation protein RhiN
13_1_20cm_2_scaffold_1450_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(16545..19232)
DNA (2688bp) protein (896aa)
Alpha-L-rhamnosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR0_RHOM4
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACY47587.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
alpha-L-rhamnosidase
13_1_20cm_2_scaffold_1450_16
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19289..19648)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S8T1_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:ABC32943.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
hypothetical protein
13_1_20cm_2_scaffold_1450_17
unknown

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comp(19590..19829)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_2_scaffold_1450_18
unknown

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comp(20113..20550)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_2_scaffold_1450_19
Paramecium caudatum, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

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comp(20751..21017)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Galdieria sulphuraria RepID=M2WXV5_GALSU
Uncharacterized protein {ECO:0000313|EMBL:BAP16534.1}; TaxID=5885 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Para
Hypothetical protein
13_1_20cm_2_scaffold_1450_20
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

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comp(21027..22100)
DNA (1074bp) protein (358aa)
Transcriptional regulator, SARP family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5X2_CONWI
Uncharacterized protein {ECO:0000313|EMBL:EOD34359.1, ECO:0000313|EnsemblProtists:EOD34359}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emili
SARP family transcriptional regulator
Displaying 20 items

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