ggKbase home page

13_1_20cm_2_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_157_1
unknown

Not on your lists

1..258
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_2_scaffold_157_2
unknown

Not on your lists

245..559
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_2_scaffold_157_3
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(696..1469)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003794798
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
13_1_20cm_2_scaffold_157_4
unknown

Not on your lists

1581..2255
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_20cm_2_scaffold_157_5
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(2333..2668)
DNA (336bp) protein (112aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BET5_METIK
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methan
FKBP-type peptidylprolyl isomerase
13_1_20cm_2_scaffold_157_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

2770..3054
DNA (285bp) protein (95aa)
Marine sediment metagenome DNA, contig: S01H1_S00671 Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_157_7
unknown

Not on your lists

3122..3523
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_2_scaffold_157_8
unknown

Not on your lists

3606..3869
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_157_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4407..5321)
DNA (915bp) protein (305aa)
Putative circadian clock protein, KaiC n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ54_ARCVS
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
circadian clock protein KaiC
13_1_20cm_2_scaffold_157_10
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5844..6392)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-O08 RepID=UPI0003829596
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
XRE family transcriptional regulator
13_1_20cm_2_scaffold_157_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6525..7505
DNA (981bp) protein (327aa)
Methionine synthase II (Cobalamin-independent) n=2 Tax=mine drainage metagenome RepID=T1CGK4_9ZZZZ
cobalamin-independent synthase MetE Tax=RBG_16_Archaea_50_20_curated
vitamin-B12 independent methionine synthase
13_1_20cm_2_scaffold_157_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7509..8714
DNA (1206bp) protein (402aa)
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Archaea_50_20_curated
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS0_RUBXD
13_1_20cm_2_scaffold_157_13
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

8711..9616
DNA (906bp) protein (302aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Tax=BJP_IG2102_Bacteroidetes_40_12
13_1_20cm_2_scaffold_157_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9650..10243)
DNA (594bp) protein (198aa)
Transcriptional regulator containing HTH domain n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RXG4_CENSY
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator containing HTH domain
13_1_20cm_2_scaffold_157_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10221..10898)
DNA (678bp) protein (226aa)
Condensin subunit ScpA n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Archaea_50_20_curated
segregation and condensation protein A
13_1_20cm_2_scaffold_157_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10895..14431)
DNA (3537bp) protein (1179aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
SMC domain-containing protein
13_1_20cm_2_scaffold_157_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(14473..15255)
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_16_Archaea_50_20_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003793FA5
13_1_20cm_2_scaffold_157_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15249..16055)
DNA (807bp) protein (269aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9Y4_METSL
13_1_20cm_2_scaffold_157_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16052..16816)
DNA (765bp) protein (255aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
hypothetical protein
13_1_20cm_2_scaffold_157_20
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

16940..17602
DNA (663bp) protein (221aa)
Pheromone shutdown protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U181_PYRFU
Uncharacterized protein {ECO:0000313|EMBL:AIF68722.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY203
hypothetical protein
13_1_20cm_2_scaffold_157_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17854..18678)
DNA (825bp) protein (275aa)
Protein APE_1980.1 n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Y1980_AERPE
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RBG_13_Bathyarchaeota_46_16b_curated
putative molybdopterin binding protein
13_1_20cm_2_scaffold_157_22
unknown

Not on your lists

comp(18705..19160)
DNA (456bp) protein (152aa)
hypothetical protein
13_1_20cm_2_scaffold_157_23
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

19399..20742
DNA (1344bp) protein (448aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S014_THEOJ
N-acetyltransferase GCN5 Tax=RBG_16_Chloroflexi_56_11_curated
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_157_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20800..21027)
DNA (228bp) protein (76aa)
Marine sediment metagenome DNA, contig: S01H1_S32854 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_157_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21166..21564
DNA (399bp) protein (133aa)
30S ribosomal protein S8e n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T4T0_9ARCH
30S ribosomal protein S8e; K02995 small subunit ribosomal protein S8e Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8e
13_1_20cm_2_scaffold_157_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21585..21908
DNA (324bp) protein (108aa)
Signal recognition particle 19 kDa protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBK0_METEZ
signal recognition particle, subunit SRP19 (SRP19); K03105 signal recognition particle subunit SRP19 Tax=RBG_16_Archaea_50_20_curated
ribonucleoprotein complex SRP, Srp19 component
13_1_20cm_2_scaffold_157_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21916..22971)
DNA (1056bp) protein (352aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1156417 species="Bac
L-threonine 3-dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q7_9BACI
L-threonine 3-dehydrogenase
13_1_20cm_2_scaffold_157_28
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

23138..24259
DNA (1122bp) protein (374aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036F62FC
7-keto-8-aminopelargonate synthetase-like enzyme Tax=RBG_13_Euryarchaeota_31_8_curated
13_1_20cm_2_scaffold_157_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

24289..24810
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LPX1_9EURY
sortase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
acetyltransferase
13_1_20cm_2_scaffold_157_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24937..25977
DNA (1041bp) protein (347aa)
Putative phosphosugar isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE4_NITGG
Putative phosphosugar isomerase {ECO:0000313|EMBL:AFU59046.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
phosphosugar isomerase
Displaying items 1-30 of 46 in total

View Taxonomy