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13_1_20cm_2_scaffold_180

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_180_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..968)
DNA (966bp) protein (322aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=GWC2_Gemmatimonadetes_71_10_curated
secA; preprotein translocase SecA subunit
13_1_20cm_2_scaffold_180_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(976..1536)
DNA (561bp) protein (187aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6Z6_OCEP5
nicotinate-nucleotide adenylyltransferase
13_1_20cm_2_scaffold_180_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1546..2316)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane assembly lipoprotein YfiO
13_1_20cm_2_scaffold_180_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2313..3233)
DNA (921bp) protein (307aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_180_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3230..4042)
DNA (813bp) protein (271aa)
Putative TPR domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VJ8_STIAD
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_180_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4096..4965)
DNA (870bp) protein (290aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPQ9_9PROT
NAD-dependent epimerase/dehydratase Tax=GWA2_Deltaproteobacteria_65_63_curated
UDP-glucuronate 5'-epimerase
13_1_20cm_2_scaffold_180_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4962..5897)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS rbh
NAD-dependent epimerase/dehydratase
13_1_20cm_2_scaffold_180_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5882..7201)
DNA (1320bp) protein (440aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleotide sugar dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXK5_9BACT
nucleotide sugar dehydrogenase
13_1_20cm_2_scaffold_180_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7198..8514)
DNA (1317bp) protein (439aa)
wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W5_GEMAT
nucleotide-sugar dehydrogenase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_180_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8511..9515)
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXC2_GRAMM alias=16ft_combo_ws3_scaffold_92_33 id=5225809 tax=16ft_combo_ws3 species=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain-containing protein
13_1_20cm_2_scaffold_180_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9512..10627)
DNA (1116bp) protein (372aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I2_GEMAT
aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_20cm_2_scaffold_180_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10658..11248)
DNA (591bp) protein (197aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZD3_DICTD
transferase hexapeptide repeat containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transferase hexapeptide repeat containing protein
13_1_20cm_2_scaffold_180_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11248..12099)
DNA (852bp) protein (284aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI0003660A98
13_1_20cm_2_scaffold_180_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12168..15461)
DNA (3294bp) protein (1098aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CARB_GEMAT
Carbamoyl-phosphate synthase large subunit glutamine-dependent
13_1_20cm_2_scaffold_180_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15445..16413)
DNA (969bp) protein (323aa)
Putative GDP-6-deoxy-D-lyxo-4-hexulose reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I6_GEMAT
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase
13_1_20cm_2_scaffold_180_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16410..17444)
DNA (1035bp) protein (345aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I7_GEMAT
13_1_20cm_2_scaffold_180_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


17465..17656
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RL28_GEODF
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpmB; 50S ribosomal protein L28
13_1_20cm_2_scaffold_180_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(17712..18068)
DNA (357bp) protein (119aa)
50S ribosomal protein L17 n=1 Tax=Frankia alni (strain ACN14a) RepID=RL17_FRAAA
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rplQ; 50S ribosomal protein L17
13_1_20cm_2_scaffold_180_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18068..19123)
DNA (1056bp) protein (352aa)
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
13_1_20cm_2_scaffold_180_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(19123..19758)
DNA (636bp) protein (212aa)
30S ribosomal protein S4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J1_GEMAT
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein S4
13_1_20cm_2_scaffold_180_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(19762..20160)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J2_GEMAT
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsK; 30S ribosomal protein S11
13_1_20cm_2_scaffold_180_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(20161..20544)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=2 Tax=Thermaerobacter RepID=E6SKX5_THEM7
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribosomal protein S13
13_1_20cm_2_scaffold_180_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20741..21169)
DNA (429bp) protein (143aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_180_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21166..21840)
DNA (675bp) protein (225aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23) Tax=RBG_16_Gemmatimonadetes_66_8_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZG60_TERRK
13_1_20cm_2_scaffold_180_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21833..22672)
DNA (840bp) protein (280aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydroorotate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J6_GEMAT
Dihydroorotate dehydrogenase
13_1_20cm_2_scaffold_180_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22669..24192)
DNA (1524bp) protein (508aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_180_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24189..25439)
DNA (1251bp) protein (417aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J7_GEMAT
cell wall hydrolase/autolysin
13_1_20cm_2_scaffold_180_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25436..25891)
DNA (456bp) protein (152aa)
SsrA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J8_GEMAT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SsrA-binding protein
13_1_20cm_2_scaffold_180_trna_1
unknown

Not on your lists

25986..26069
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_180_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26143..27570)
DNA (1428bp) protein (476aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF alias=16ft_combo_ws3_scaffold_361_57 id=5224911 tax=16ft_combo_ws3 species=Chloracidobacterium thermophilum (strain B) genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria rbh
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein
Displaying items 1-30 of 52 in total

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