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13_1_20cm_2_scaffold_203

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_203_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3..1205)
DNA (1203bp) protein (401aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFR4_PYRYC
tRNA(ile2) 2-agmatinylcytidine synthetase; K06932 Tax=RBG_13_Bathyarchaeota_46_16b_curated
nucleic acid-binding protein
13_1_20cm_2_scaffold_203_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1342..1575)
DNA (234bp) protein (78aa)
Regulatory protein, AsnC/Lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N314_9ARCH
AsnC family transcriptional regulator Tax=RBG_16_Archaea_50_20_curated
regulatory protein, AsnC/Lrp family
13_1_20cm_2_scaffold_203_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2118..2927
DNA (810bp) protein (270aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWB1_METMA
Signal peptidase, type IV-prepilin/preflagellin {ECO:0000313|EMBL:AKB62839.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;"
hypothetical protein
13_1_20cm_2_scaffold_203_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2924..3799
DNA (876bp) protein (292aa)
Putative TrmB family transcriptional regulator n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVP2_METPS
TrmB family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
putative TrmB family transcriptional regulator
13_1_20cm_2_scaffold_203_5
unknown

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4419..4673
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_6
unknown

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4814..5293
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_7
unknown

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5299..5784
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_8
unknown

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5888..6403
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_9
unknown

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6408..7502
DNA (1095bp) protein (365aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_10
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7524..8567
DNA (1044bp) protein (348aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX01_METHD
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AGB48499.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Me
RecA-superfamily ATPase possibly involved in signal transduction
13_1_20cm_2_scaffold_203_11
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8560..9342
DNA (783bp) protein (261aa)
UPI0003D1C594 related cluster n=1 Tax=unknown RepID=UPI0003D1C594
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:ETA67929.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; M
hypothetical protein
13_1_20cm_2_scaffold_203_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9345..10952
DNA (1608bp) protein (536aa)
type IV secretory pathway protein n=1 Tax=Nitrosopumilus sp. AR RepID=UPI00037104EA
type II secretion system protein Tax=RBG_13_Bathyarchaeota_38_9_curated
type II secretion system protein
13_1_20cm_2_scaffold_203_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10949..12448
DNA (1500bp) protein (500aa)
Bacterial type II secretion system protein F domain-containing protein n=2 Tax=Candidatus Nitrosoarchaeum RepID=F9CX44_9ARCH
type II secretion system protein F Tax=RBG_13_Bathyarchaeota_38_9_curated
putative type II secretion system F domain protein
13_1_20cm_2_scaffold_203_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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12461..13447
DNA (987bp) protein (329aa)
Type II secretion system F domain-containing protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7P3_9ARCH
Flp pilus assembly protein TadC Tax=RBG_13_Bathyarchaeota_38_9_curated
putative type II secretion system F domain protein
13_1_20cm_2_scaffold_203_15
unknown

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comp(13824..14117)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_203_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(14570..15463)
DNA (894bp) protein (298aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_203_17
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15546..16589
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EJM1_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD85324.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
UbiA family prenyltransferase
13_1_20cm_2_scaffold_203_18
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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16562..17290
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S262_FERPA
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
13_1_20cm_2_scaffold_203_19
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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17403..18149
DNA (747bp) protein (249aa)
Putative circadian clock protein, KaiC n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0H8_THEPD
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ABL78958.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pe
putative circadian clock protein, KaiC
13_1_20cm_2_scaffold_203_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18206..19756
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q96YS0_SULTO
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_203_21
unknown

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20371..20841
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying 21 items

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