ggKbase home page

13_1_20cm_2_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 85 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_210_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

265..1263
DNA (999bp) protein (333aa)
Replication factor C small subunit n=3 Tax=Sulfolobus acidocaldarius RepID=RFCS_SULAC
DNA replication factor C, small subunit; K04801 replication factor C small subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
rfc; replication factor C small subunit
13_1_20cm_2_scaffold_210_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

1376..2476
DNA (1101bp) protein (367aa)
Replication factor C large subunit n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=RFCL_THEPD
replication factor C large subunit; K04800 replication factor C large subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
replication factor C large subunit
13_1_20cm_2_scaffold_210_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3505..4842)
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDQ7_9EURY
adenylosuccinate lyase Tax=RBG_13_Bathyarchaeota_38_9_curated
adenylosuccinate lyase
13_1_20cm_2_scaffold_210_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4912..6258
DNA (1347bp) protein (449aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RBG_16_Archaea_50_20_curated
Asparagine synthetase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JIA2_THEKO
asparagine synthase
13_1_20cm_2_scaffold_210_5
unknown

Not on your lists

6349..6852
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_20cm_2_scaffold_210_6
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6885..7343
DNA (459bp) protein (153aa)
Rhodanese-like protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YVR1_DESAF
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
rhodanese-like protein
13_1_20cm_2_scaffold_210_7
unknown

Not on your lists

comp(7694..7945)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_2_scaffold_210_8
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8099..9937
DNA (1839bp) protein (613aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HKL3_CYAP4
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66880.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_210_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9942..10703
DNA (762bp) protein (254aa)
ABC transporter related protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLE9_MOOTA
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC transporter
13_1_20cm_2_scaffold_210_10
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10700..11227)
DNA (528bp) protein (176aa)
ABC transporter, ATP-binding protein n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6N2Y4_GORPV
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67211.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_210_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(11243..12130)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000372F57B
putative oxidoreductase Tax=RBG_16_Chloroflexi_57_9_curated
luciferase family protein
13_1_20cm_2_scaffold_210_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

12259..13203
DNA (945bp) protein (315aa)
ABC transporter related n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZJ0_THEPD
ABC transporter-like protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter
13_1_20cm_2_scaffold_210_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13200..13964
DNA (765bp) protein (255aa)
ABC transporter Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_210_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13961..14773
DNA (813bp) protein (271aa)
ABC-2 type transporter n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5TZU7_THEAM
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter
13_1_20cm_2_scaffold_210_15
unknown

Not on your lists

14776..15702
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_20cm_2_scaffold_210_16
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

15777..17120
DNA (1344bp) protein (448aa)
FAD dependent oxidoreductase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B9Q7_9ARCH
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_210_17
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(17153..17890)
DNA (738bp) protein (246aa)
PE-PGRS family protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8N2_9BURK
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
PE-PGRS family protein
13_1_20cm_2_scaffold_210_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18623..19213
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q979E8_THEVO
Putative transposase IS605 OrfB family {ECO:0000313|EMBL:AIC15978.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
putative transposase IS605 OrfB family
13_1_20cm_2_scaffold_210_19
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19276..19674)
DNA (399bp) protein (133aa)
Lactoylglutathione lyase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRQ9_SOLCM
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:AFD07640.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="So
lactoylglutathione lyase family protein
13_1_20cm_2_scaffold_210_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19717..20244)
DNA (528bp) protein (176aa)
Putative nucleic acid-binding protein with PIN domain and Zn ribbon n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9X9_9EURY
PilT protein domain protein; K07060 UPF0271 protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_210_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20241..21080)
DNA (840bp) protein (280aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RBG_16_Archaea_50_20_curated
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PPNK_METKA
sugar kinase
13_1_20cm_2_scaffold_210_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists


21206..21601
DNA (396bp) protein (132aa)
Translation initiation factor 5A n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=IF5A_HYPBU
eIF-5A; translation initiation factor 5A Tax=RBG_16_Bathyarchaeota_48_13_curated
translation initiation factor IF-5A
13_1_20cm_2_scaffold_210_23
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

21642..22574
DNA (933bp) protein (311aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RBG_16_Bathyarchaeota_57_9_curated
deoxyhypusine synthase (EC:2.5.1.46)
Probable deoxyhypusine synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX03_METFV
13_1_20cm_2_scaffold_210_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


22577..23899
DNA (1323bp) protein (441aa)
Signal recognition particle 54 kDa protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFZ7_9EURY
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Archaea_50_20_curated
Signal recognition particle GTPase
13_1_20cm_2_scaffold_210_25
unknown

Not on your lists

comp(23952..24308)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_2_scaffold_210_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(24312..24719)
DNA (408bp) protein (136aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_210_27
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

24891..26147
DNA (1257bp) protein (419aa)
Protein containing DUF1006 n=2 Tax=mine drainage metagenome RepID=T1BAI8_9ZZZZ
hypothetical protein; K09927 hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_20cm_2_scaffold_210_28
unknown

Not on your lists

26544..26690
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_2_scaffold_210_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26732..27202)
DNA (471bp) protein (157aa)
putative protein phosphatase (EC:3.1.3.-)
Dual specificity protein phosphatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Y9_9SPHI
Dual specificity protein phosphatase {ECO:0000313|EMBL:EHQ30411.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source
13_1_20cm_2_scaffold_210_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(27287..27808)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000375BB7F
Nitroreductase {ECO:0000313|EMBL:AIF84056.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaer
nitroreductase
Displaying items 1-30 of 85 in total

View Taxonomy