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13_1_20cm_2_scaffold_2410

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2410_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..954
DNA (954bp) protein (318aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C966_SPHTD
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
putative RNA polymerase, sigma-24 subunit, ECF subfamily
13_1_20cm_2_scaffold_2410_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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1213..1755
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A0J3_9CAUL
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_20cm_2_scaffold_2410_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1799..2245
DNA (447bp) protein (149aa)
Putative membrane protein n=1 Tax=Pseudomonas sp. GM79 RepID=J3I745_9PSED
Membrane protein-like protein; K08983 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
membrane protein
13_1_20cm_2_scaffold_2410_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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2321..2881
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein alias=RAAC39_AAC7_scaffold_67_180,RAAC39_C00004G00180 id=717838 tax=RAAC39 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia
hypothetical protein
13_1_20cm_2_scaffold_2410_5
unknown

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3087..3626
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_20cm_2_scaffold_2410_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3667..5907
DNA (2241bp) protein (747aa)
Protein kinase {ECO:0000313|EMBL:AHG92755.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
Serine/threonine protein kinase alias=RBG1_607,RBG1_C00001G00607 id=1250165 tax=RBG1 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
13_1_20cm_2_scaffold_2410_7
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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6003..6215
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKS7_9PLAN
hypothetical protein; K09165 hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
13_1_20cm_2_scaffold_2410_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6202..6351
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG88786.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_2_scaffold_2410_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6675..9044
DNA (2370bp) protein (790aa)
peptidase S9 n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B7427E rbh
peptidase S9B dipeptidylpeptidase IV subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
peptidase S9B dipeptidylpeptidase IV subunit
13_1_20cm_2_scaffold_2410_10
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9050..9277
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RF04_STRVP
Uncharacterized protein {ECO:0000313|EMBL:AIQ70095.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
hypothetical protein
13_1_20cm_2_scaffold_2410_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9274..11109
DNA (1836bp) protein (612aa)
Putative permease n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C7W1_MYXFH
Permease {ECO:0000313|EMBL:AHG88188.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease
13_1_20cm_2_scaffold_2410_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11147..11434
DNA (288bp) protein (96aa)
Regulatory protein, FmdB family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ24_OPITP
type I antifreeze protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FmdB family regulatory protein
13_1_20cm_2_scaffold_2410_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


11431..13077
DNA (1647bp) protein (549aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWC2_Gemmatimonadetes_71_10_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E9_GEMAT
13_1_20cm_2_scaffold_2410_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13074..13994
DNA (921bp) protein (307aa)
PfkB family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F0_GEMAT
PfkB family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
PfkB family protein
13_1_20cm_2_scaffold_2410_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13991..15016
DNA (1026bp) protein (342aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F1_GEMAT
13_1_20cm_2_scaffold_2410_16
unknown

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15050..15904
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_20cm_2_scaffold_2410_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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15867..16535
DNA (669bp) protein (223aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003730332
riboflavin biosynthesis protein RibD
Displaying 17 items

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