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13_1_20cm_2_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_255_1
Methanomassiliicoccus luminyensis, Methanomassiliicoccus, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369AA
13_1_20cm_2_scaffold_255_2
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(513..953)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036B5055
Cell entry (Mce) related family protein {ECO:0000313|EMBL:CQD09688.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lenti
hypothetical protein
13_1_20cm_2_scaffold_255_3
unknown

Not on your lists

comp(1623..1826)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_4
unknown

Not on your lists

2154..2435
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_5
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2620..3705
DNA (1086bp) protein (362aa)
Pyrrolo-quinoline quinone repeat-containing protein (Fragment) n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L197_9EURY
WD-domain containing protein {ECO:0000313|EMBL:AKB12630.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarci
13_1_20cm_2_scaffold_255_6
unknown

Not on your lists

comp(3792..3929)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_7
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4407..5297)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG77964.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT
hypothetical protein
13_1_20cm_2_scaffold_255_8
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5520..6281
DNA (762bp) protein (254aa)
Pirin domain protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z270_DESAF
Pirin domain protein {ECO:0000313|EMBL:EGJ51279.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
Pirin domain-containing protein
13_1_20cm_2_scaffold_255_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6357..6851)
DNA (495bp) protein (165aa)
N-acetyltransferase GCN5; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_255_10
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(6848..7669)
DNA (822bp) protein (274aa)
Amidohydrolase 2 n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XB57_CELAD
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
amidohydrolase
13_1_20cm_2_scaffold_255_11
unknown

Not on your lists

comp(7699..8253)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8359..8628)
DNA (270bp) protein (90aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_255_13
unknown

Not on your lists

comp(8635..9240)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_14

Not on your lists

comp(9391..9651)
DNA (261bp) protein (87aa)
Marine sediment metagenome DNA, contig: S06H3_L01033 {ECO:0000313|EMBL:GAI16800.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_20cm_2_scaffold_255_15
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(9700..10704)
DNA (1005bp) protein (335aa)
alcohol dehydrogenase n=1 Tax=Marinococcus halotolerans RepID=UPI0003B3EDA5
alcohol dehydrogenase Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
alcohol dehydrogenase
13_1_20cm_2_scaffold_255_16
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10810..11088)
DNA (279bp) protein (93aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EGY8_PYRF1
PilT protein domain containing protein
13_1_20cm_2_scaffold_255_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(11204..11464)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) RepID=C4KEN2_SULIK
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_255_18
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11784..12455)
DNA (672bp) protein (224aa)
Putative aminoacrylate hydrolase RutD n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MCB1_9ACTO
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:EPJ37138.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghanie
alpha/beta hydrolase
13_1_20cm_2_scaffold_255_19
unknown

Not on your lists

12792..13670
DNA (879bp) protein (293aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_20
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13968..15110)
DNA (1143bp) protein (381aa)
Saccharopine dehydrogenase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CVG8_9BACT
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
putative L-lysine 6-dehydrogenase
13_1_20cm_2_scaffold_255_21
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

15194..15514
DNA (321bp) protein (107aa)
YCII-related protein n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CVA2_MARPP
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
13_1_20cm_2_scaffold_255_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15511..16707)
DNA (1197bp) protein (399aa)
Geranylgeranyl reductase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUF0_METCG
geranylgeranyl reductase Tax=RBG_16_Archaea_50_20_curated
geranylgeranyl reductase
13_1_20cm_2_scaffold_255_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16716..17228)
DNA (513bp) protein (171aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_1_20cm_2_scaffold_255_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17631..18041
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGK4_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ACU61709.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
hypothetical protein
13_1_20cm_2_scaffold_255_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18130..19269
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA synthetase beta chain n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A048_FERFK
succinyl-CoA synthetase subunit beta
13_1_20cm_2_scaffold_255_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

19270..20151
DNA (882bp) protein (294aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCW4_METIK
succinyl-CoA synthetase subunit alpha
13_1_20cm_2_scaffold_255_27
unknown

Not on your lists

comp(20156..20383)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_28
unknown

Not on your lists

comp(20668..21369)
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_20cm_2_scaffold_255_29
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(21505..22302)
DNA (798bp) protein (266aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Thermococcus sp. AM4 RepID=G2M2H2_9EURY
Dimethyladenosine transferase
13_1_20cm_2_scaffold_255_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22307..22891)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1Z8_FERPA
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
Displaying items 1-30 of 48 in total

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