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13_1_20cm_2_scaffold_2728

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2728_1

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comp(25..291)
DNA (267bp) protein (89aa)
Marine sediment metagenome DNA, contig: S01H1_C00568 {ECO:0000313|EMBL:GAF79349.1}; Marine sediment metagenome DNA, contig: S01H1_S32922 {ECO:0000313|EMBL:GAG29121.1}; TaxID=412755 species="unclassifi
13_1_20cm_2_scaffold_2728_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(317..631)
DNA (315bp) protein (105aa)
nuoK; proton-translocating NADH-ubiquinone oxidoreductase subunit k; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RBG_16_Chloroflexi_68_14_curated
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMG5_9CHLR
13_1_20cm_2_scaffold_2728_3

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comp(631..1140)
DNA (510bp) protein (170aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNH8_DESK7
Marine sediment metagenome DNA, contig: S01H1_C00568 {ECO:0000313|EMBL:GAF79339.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_20cm_2_scaffold_2728_4

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comp(1140..2393)
DNA (1254bp) protein (418aa)
nuoH; NADH ubiquinone oxidoreductase chain H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H n=3 Tax=Dehalococcoides mccartyi RepID=NUOH_DEHSC
Marine sediment metagenome DNA, contig: S01H1_L02806 {ECO:0000313|EMBL:GAF81155.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_2728_5

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comp(2652..3575)
DNA (924bp) protein (308aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0K8_DEHLB
Uncharacterized protein {ECO:0000313|EMBL:KKK82427.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_2728_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(3578..4114)
DNA (537bp) protein (179aa)
NADH dehydrogenase 24 kDa subunit; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Chloroflexi_68_14_curated
NADH-quinone oxidoreductase n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TQ25_9FIRM
NAD(P)H-quinone oxidoreductase subunit J
13_1_20cm_2_scaffold_2728_7

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comp(4095..4466)
DNA (372bp) protein (124aa)
NADH-quinone oxidoreductase subunit A n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5A7_DESAS
Marine sediment metagenome DNA, contig: S01H1_S33130 {ECO:0000313|EMBL:GAG30745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_20cm_2_scaffold_2728_8
unknown

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4669..4890
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_2728_9

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4957..5676
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002F31150
Uncharacterized protein {ECO:0000313|EMBL:KKK85015.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulator, PadR-like family
13_1_20cm_2_scaffold_2728_10
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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5673..6179
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0E0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:BAN01989.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
hypothetical protein
13_1_20cm_2_scaffold_2728_11
unknown

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6200..6535
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_2_scaffold_2728_12
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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6644..8026
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Zea mays RepID=K7VD18_MAIZE
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
ABC transporter
13_1_20cm_2_scaffold_2728_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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8004..9347
DNA (1344bp) protein (448aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2CVV4_HORVD
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
ABC-1 domain-containing protein
13_1_20cm_2_scaffold_2728_14

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9554..9973
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 888 RepID=B8R8S0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL44363.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_2728_15

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10034..10726
DNA (693bp) protein (231aa)
Thiolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C159_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKL79208.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiolase
13_1_20cm_2_scaffold_2728_16

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10809..11159
DNA (351bp) protein (117aa)
thiolase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D4C6EA
Uncharacterized protein {ECO:0000313|EMBL:KKL79208.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiolase
13_1_20cm_2_scaffold_2728_17
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11389..12375
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037F11A0 rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:EJJ03835.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001
2-nitropropane dioxygenase
13_1_20cm_2_scaffold_2728_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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12413..13063
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003772158
PHP domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
PHP domain-containing protein
13_1_20cm_2_scaffold_2728_19
unknown

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13256..13660
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_2_scaffold_2728_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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13879..14361
DNA (483bp) protein (161aa)
Dehydratase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJC6_DESAA
dehydratase Tax=RBG_16_Chloroflexi_68_14_curated
dehydratase
13_1_20cm_2_scaffold_2728_21

Not on your lists

14521..14943
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00038194F0
Marine sediment metagenome DNA, contig: S01H1_S30503 {ECO:0000313|EMBL:GAG30894.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MaoC domain-containing protein dehydratase
13_1_20cm_2_scaffold_2728_22

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15263..16183
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037A0515 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK89367.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dehydrogenase
13_1_20cm_2_scaffold_2728_23
unknown

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comp(16293..16643)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_2_scaffold_2728_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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16800..17765
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037A0515
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Chloroflexi_64_32_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_2728_25
unknown

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17811..17870
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 25 items

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