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13_1_20cm_2_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_319_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(51..557)
DNA (507bp) protein (169aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=GWA2_Rokubacteria_73_35_curated
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0X2_9FIRM
phosphoribosylglycinamide formyltransferase
13_1_20cm_2_scaffold_319_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(671..1702)
DNA (1032bp) protein (344aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB46_AMMDK
13_1_20cm_2_scaffold_319_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1704..3116)
DNA (1413bp) protein (471aa)
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFN0_9BACT
13_1_20cm_2_scaffold_319_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3097..5250)
DNA (2154bp) protein (718aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWA2_Rokubacteria_73_35_curated
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X375_9BACT
13_1_20cm_2_scaffold_319_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5257..5970)
DNA (714bp) protein (238aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWA2_Rokubacteria_73_35_curated
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIT5_9BACT
phosphoribosylformylglycinamidine synthase I
13_1_20cm_2_scaffold_319_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5983..6252)
DNA (270bp) protein (90aa)
phosphoribosylformylglycinamidine synthase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B30105
yexA; phosphoribosylformylglycinamidine synthase protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yexA; phosphoribosylformylglycinamidine synthase protein
13_1_20cm_2_scaffold_319_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6249..7022)
DNA (774bp) protein (258aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CH61_DESK7
13_1_20cm_2_scaffold_319_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7037..8335)
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Adenylosuccinate lyase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIT3_9BACT
adenylosuccinate lyase
13_1_20cm_2_scaffold_319_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8411..9034)
DNA (624bp) protein (208aa)
Putative phosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ77_9RHIZ
Phosphoglycolate phosphatase {ECO:0000313|EMBL:KFE68128.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source=
HAD family hydrolase
13_1_20cm_2_scaffold_319_10
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8979..9953)
DNA (975bp) protein (325aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KJ07_9ACTO
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EKX60373.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 9
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_319_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9974..11239)
DNA (1266bp) protein (422aa)
insulinase family protein (EC:3.4.24.-)
Putative protease n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X371_9BACT
ymxG; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_319_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11251..13392)
DNA (2142bp) protein (714aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK9_9BACT
13_1_20cm_2_scaffold_319_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(13523..13792)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D9A6_9FIRM
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=GWA2_Rokubacteria_73_35_curated
30S ribosomal protein S15
13_1_20cm_2_scaffold_319_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13933..14850)
DNA (918bp) protein (306aa)
FMN adenylyltransferase; riboflavin kinase (EC:2.7.7.2 2.7.1.26); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Riboflavin biosynthesis protein RibF n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIC6_ROSCS
riboflavin biosynthesis protein RibF
13_1_20cm_2_scaffold_319_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14813..15742)
DNA (930bp) protein (310aa)
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037F6B75
tRNA pseudouridine synthase B
13_1_20cm_2_scaffold_319_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15739..16737)
DNA (999bp) protein (333aa)
Exopolyphosphatase-like enzyme n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLA2_9FIRM
exopolyphosphatase-related proteins; K06881 phosphoesterase RecJ domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
phosphoesterase RecJ domain-containing protein
13_1_20cm_2_scaffold_319_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16734..17087)
DNA (354bp) protein (118aa)
ribosome-binding factor A n=1 Tax=Cohnella laeviribosi RepID=UPI0003625819
ribosome-binding factor A Tax=GWA2_Rokubacteria_73_35_curated
rbfA; ribosome-binding factor A
13_1_20cm_2_scaffold_319_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17087..17377)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRZ4_DESRL
hypothetical protein; K09764 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_20cm_2_scaffold_319_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17402..19942)
DNA (2541bp) protein (847aa)
Translation initiation factor IF-2 n=1 Tax=Thermincola potens (strain JR) RepID=D5XF13_THEPJ
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
translation initiation factor IF-2
13_1_20cm_2_scaffold_319_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20354..20818)
DNA (465bp) protein (155aa)
NusA antitermination factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIT2_KORVE
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NusA antitermination factor
13_1_20cm_2_scaffold_319_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20812..21639)
DNA (828bp) protein (276aa)
NusA antitermination factor n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A394_NATTJ
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NusA antitermination factor
13_1_20cm_2_scaffold_319_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21664..22131)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNI0_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_319_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22560..23657)
DNA (1098bp) protein (366aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF6_9BACT
13_1_20cm_2_scaffold_319_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23667..25031)
DNA (1365bp) protein (455aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
rseP; regulator of sigma E protease (EC:3.4.24.-)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000361E9D7
13_1_20cm_2_scaffold_319_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25028..26203)
DNA (1176bp) protein (392aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QRH9_CHLP8
13_1_20cm_2_scaffold_319_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26200..27096)
DNA (897bp) protein (299aa)
cdsA; phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHE1_CHLTF
13_1_20cm_2_scaffold_319_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27098..27844)
DNA (747bp) protein (249aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31)
UDP pyrophosphate synthase n=1 Tax=Brevibacillus brevis RepID=UPI00034798B8
13_1_20cm_2_scaffold_319_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(27867..28430)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=RRF_DESDG
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ribosome recycling factor
13_1_20cm_2_scaffold_319_29
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(28436..29176)
DNA (741bp) protein (247aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K327_DESAC
13_1_20cm_2_scaffold_319_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(29178..29783)
DNA (606bp) protein (202aa)
elongation factor Ts n=1 Tax=Hippea alviniae RepID=UPI0003B6DA4E
elongation factor Ts; K02357 elongation factor Ts Tax=GWA2_Rokubacteria_73_35_curated
tsf; elongation factor Ts
Displaying items 1-30 of 40 in total

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