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13_1_20cm_2_scaffold_3484

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3484_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..2370)
DNA (2370bp) protein (790aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mutS; DNA mismatch repair protein MutS
13_1_20cm_2_scaffold_3484_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2367..3227)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3484_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3224..4225)
DNA (1002bp) protein (334aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM8_GEMAT
13_1_20cm_2_scaffold_3484_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4274..4762)
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_3484_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4829..5473)
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_3484_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5686..6225)
DNA (540bp) protein (180aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative ADP-ribose pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN1_GEMAT
NUDIX hydrolase
13_1_20cm_2_scaffold_3484_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(6243..6845)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFS5_9CHLR
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF218
13_1_20cm_2_scaffold_3484_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6857..7633)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PBS lyase HEAT domain protein repeat-containing protein
13_1_20cm_2_scaffold_3484_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7630..9306)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_3484_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9306..9959)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_3484_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10258..11172)
DNA (915bp) protein (305aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_1_20cm_2_scaffold_3484_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11251..12006
DNA (756bp) protein (252aa)
Conserved hypothetical signal peptide protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM79_KORVE
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABF42021.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
signal peptide protein
13_1_20cm_2_scaffold_3484_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12003..15107
DNA (3105bp) protein (1035aa)
Glycosyl hydrolase, BNR repeat n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E0_SOLUE
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:ABJ83636.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;"
BNR repeat-containing glycosyl hydrolase
13_1_20cm_2_scaffold_3484_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

15086..16048
DNA (963bp) protein (321aa)
UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) {ECO:0000313|EMBL:CBE67363.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBE67363.1};; TaxID=671143 species="Bacteria; candidate division NC10
galE; UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) (EC:5.1.3.2)
UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIZ8_9BACT
13_1_20cm_2_scaffold_3484_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16052..16951
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PYK6_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nucleotidyltransferase
13_1_20cm_2_scaffold_3484_16
unknown

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comp(17048..17152)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_2_scaffold_3484_17
unknown

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comp(17342..17713)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_2_scaffold_3484_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17737..18336
DNA (600bp) protein (200aa)
Sodium-solute symporter, putative n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHP0_9BACT
Na+/solute symporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Na+/solute symporter
Displaying 18 items

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