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13_1_20cm_2_scaffold_364

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_364_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..570
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362ADA2
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG88425.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Xylose isomerase domain-containing protein TIM barrel
13_1_20cm_2_scaffold_364_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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613..1113
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AFDD3
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
13_1_20cm_2_scaffold_364_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1149..1553
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Thermotoga RepID=B9KAZ1_THENN
holliday junction resolvase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Holliday junction resolvase
13_1_20cm_2_scaffold_364_4
unknown

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1868..2089
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_364_5
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2110..2337
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036A2140
Uncharacterized protein {ECO:0000313|EMBL:CCA59689.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
hypothetical protein
13_1_20cm_2_scaffold_364_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2345..2632
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRP0_9BACT
type I antifreeze protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulatory protein, FmdB family
13_1_20cm_2_scaffold_364_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2629..3669
DNA (1041bp) protein (347aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWC2_Gemmatimonadetes_71_10_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E9_GEMAT
13_1_20cm_2_scaffold_364_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3669..5063
DNA (1395bp) protein (465aa)
PfkB family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F0_GEMAT
PfkB family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
PfkB domain protein
13_1_20cm_2_scaffold_364_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5060..6103
DNA (1044bp) protein (348aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F1_GEMAT
phosphoribosylformylglycinamidine cyclo-ligase
13_1_20cm_2_scaffold_364_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6117..7190
DNA (1074bp) protein (358aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-
Riboflavin biosynthesis protein RibD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F3_GEMAT
riboflavin biosynthesis protein RibD
13_1_20cm_2_scaffold_364_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7172..7759
DNA (588bp) protein (196aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Riboflavin synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F4_GEMAT
Lumazine-binding domain protein
13_1_20cm_2_scaffold_364_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7741..8946
DNA (1206bp) protein (402aa)
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (EC:3.5.4.25 4.1.99.12); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F5_GEMAT
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_20cm_2_scaffold_364_13
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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9000..9422
DNA (423bp) protein (141aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEZ0_AMICL
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
13_1_20cm_2_scaffold_364_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9385..9816
DNA (432bp) protein (144aa)
N utilization substance protein B homolog n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUSB_SOLUE
nusB; antitermination protein NusB; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N utilization substance protein B-like protein
13_1_20cm_2_scaffold_364_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9813..10943
DNA (1131bp) protein (377aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F8_GEMAT
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90656.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glycosyl transferase group 1
13_1_20cm_2_scaffold_364_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10947..11288
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_364_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11285..12277
DNA (993bp) protein (331aa)
hprK; HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HPr kinase/phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F9_GEMAT
hprK; HPr kinase/phosphorylase
13_1_20cm_2_scaffold_364_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12270..12659
DNA (390bp) protein (130aa)
phosphotransferase system enzyme IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G0_GEMAT
PTS system fructose subfamily IIA component
13_1_20cm_2_scaffold_364_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12656..13129
DNA (474bp) protein (158aa)
Phosphotransferase system enzyme IIB component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G1_GEMAT
phosphotransferase system enzyme IIB component Tax=GWC2_Gemmatimonadetes_71_10_curated
PTS system sorbose subfamily IIB component
13_1_20cm_2_scaffold_364_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13126..13827
DNA (702bp) protein (234aa)
Putative phosphotransferase system enzyme IIC component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G2_GEMAT
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:AHG90661.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphotransferase system PTS sorbose-specific IIC subunit
13_1_20cm_2_scaffold_364_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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13836..14552
DNA (717bp) protein (239aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
phosphotransferase system enzyme IID component; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphotransferase system enzyme IID component
13_1_20cm_2_scaffold_364_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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14543..14848
DNA (306bp) protein (102aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
HPrNtr
Phosphotransferase system, phosphocarrier protein HPr alias=gwe2_scaffold_515_9 id=2070136 tax=TA06 species=Chthoniobacter flavus Ellin428 genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia
13_1_20cm_2_scaffold_364_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14845..16656
DNA (1812bp) protein (604aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
ptsI; phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
13_1_20cm_2_scaffold_364_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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16667..17878
DNA (1212bp) protein (404aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
13_1_20cm_2_scaffold_364_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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17871..19220
DNA (1350bp) protein (450aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
adenosylhomocysteinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_364_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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19220..19747
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
13_1_20cm_2_scaffold_364_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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19767..20702
DNA (936bp) protein (312aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_364_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20856..21434
DNA (579bp) protein (193aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B3S1_PELLD
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, periplasmic subunit
13_1_20cm_2_scaffold_364_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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21618..22559
DNA (942bp) protein (314aa)
hemin ABC transporter permease n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AD06
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iron ABC transporter
13_1_20cm_2_scaffold_364_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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22588..23391
DNA (804bp) protein (268aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
Displaying items 1-30 of 45 in total

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