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13_1_20cm_2_scaffold_42

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Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_42_1
unknown

Not on your lists

1..156
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

192..767
DNA (576bp) protein (192aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_20cm_2_scaffold_42_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

745..2103
DNA (1359bp) protein (453aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTM2_9EURY
13_1_20cm_2_scaffold_42_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

2100..2585
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
hypothetical protein; K09122 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_42_5
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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2582..3217
DNA (636bp) protein (212aa)
Protein Ferp_2479 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S296_FERPA
hypothetical protein; K09141 hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
AMMECR1 domain protein
13_1_20cm_2_scaffold_42_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3220..4404
DNA (1185bp) protein (395aa)
Glycosyltransferase 28 domain protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6Y7_KORCO
glycosyltransferase Tax=RBG_16_Archaea_50_20_curated
glycosyltransferase family 28 protein
13_1_20cm_2_scaffold_42_7
unknown

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4482..4937
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5314..6126
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036D57CD
tRNA methyltransferase complex GCD14 subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
type 11 methyltransferase
13_1_20cm_2_scaffold_42_9
unknown

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6236..6418
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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6495..7928
DNA (1434bp) protein (478aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Bathyarchaeota_48_13_curated
UPI0003D1C3C1 related cluster n=1 Tax=unknown RepID=UPI0003D1C3C1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_2_scaffold_42_11
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

8242..8940
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037ADF96
glycosyltransferase group 2 Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_42_12
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(8937..9704)
DNA (768bp) protein (256aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein
13_1_20cm_2_scaffold_42_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

9759..10337
DNA (579bp) protein (193aa)
M1_3263; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
ArsR family transcriptional regulator n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B3B52B
UbiE/COQ5 methyltransferase Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_20cm_2_scaffold_42_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(10857..11300)
DNA (444bp) protein (148aa)
Membrane spanning protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5G3_THERP
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
membrane spanning protein
13_1_20cm_2_scaffold_42_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11455..13089)
DNA (1635bp) protein (545aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKZ7_THELI
13_1_20cm_2_scaffold_42_16
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(13222..13926)
DNA (705bp) protein (235aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcac
transaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4X2_METSF
13_1_20cm_2_scaffold_42_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13934..14875)
DNA (942bp) protein (314aa)
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AFU60392.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFU60392.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
tktB; transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, C-terminal subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML5_NITGG
13_1_20cm_2_scaffold_42_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14875..15561)
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium ultunense Esp RepID=M1ZEX2_9CLOT
ribulose-phosphate 3-epimerase
13_1_20cm_2_scaffold_42_19
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15558..16385)
DNA (828bp) protein (276aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
Transketolase domain protein {ECO:0000313|EMBL:ADG83597.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR)
transketolase
13_1_20cm_2_scaffold_42_20
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16388..17413)
DNA (1026bp) protein (342aa)
PfkB domain protein alias=gwe2_scaffold_8_231 id=2166669 tax=TA06 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
13_1_20cm_2_scaffold_42_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

18096..19322
DNA (1227bp) protein (409aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB1_NITGG
acyl-CoA dehydrogenase Tax=RBG_16_Archaea_50_20_curated
putative acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_42_22
unknown

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19470..19844
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_23
unknown

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19963..20229
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_24
unknown

Not on your lists

20326..20757
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

20831..22111
DNA (1281bp) protein (427aa)
FixC; dehydrogenases; K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] Tax=RBG_16_Euryarchaeota_68_13_curated
Dehydrogenases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1D5_PELTS
FixC; dehydrogenases
13_1_20cm_2_scaffold_42_26
unknown

Not on your lists

22466..22834
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_42_27
RLO_RIF03_38_15, RIF3, Bacteria

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comp(22844..23827)
DNA (984bp) protein (328aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EXB5_9DELT
electron transfer flavoprotein alpha-subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
electron transfer flavoprotein, alpha subunit
13_1_20cm_2_scaffold_42_28
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(23832..24269)
DNA (438bp) protein (146aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKP2_IGNAJ alias=16ft_combo_ws3_scaffold_1380_13 id=5223689 tax=16ft_combo_ws3 species=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
electron transfer flavoprotein subunit beta Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
electron transfer flavoprotein subunit beta
13_1_20cm_2_scaffold_42_29
RBG_16_Archaea_50_20_curated, Archaea

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24710..25000
DNA (291bp) protein (97aa)
Sec-independent protein translocase protein TatA n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D2_9ARCH
twin arginine-targeting protein translocase; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatA
13_1_20cm_2_scaffold_42_30
unknown

Not on your lists

25011..25274
DNA (264bp) protein (88aa)
sec-independent protein translocase protein TatA
Displaying items 1-30 of 73 in total

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