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13_1_20cm_2_scaffold_4312

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4312_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..937
DNA (936bp) protein (312aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF91_ANADF
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
sigma-54 dependent trancsriptional regulator
13_1_20cm_2_scaffold_4312_2
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

934..1302
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QG13_DESB2
chemotactic response regulator CheY; K03413 two-component system, chemotaxis family, response regulator CheY Tax=RBG_13_Deltaproteobacteria_60_28_curated
response regulator receiver protein
13_1_20cm_2_scaffold_4312_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

1299..2108
DNA (810bp) protein (270aa)
sensor histidine kinase; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Sensor protein (EC:2.7.13.3)
hypothetical protein, partial n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000380C9DB
13_1_20cm_2_scaffold_4312_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2086..3306
DNA (1221bp) protein (407aa)
Fis family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U834_MYXSD
two component sigma54 specific Fis family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_4312_5
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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3601..4914
DNA (1314bp) protein (438aa)
ATPase, FliI/YscN family {ECO:0000313|EMBL:EFC90325.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EFC90325.1};; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosul
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
ATPase, FliI/YscN family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z3L9_9BACT rbh
13_1_20cm_2_scaffold_4312_6
unknown

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4911..5072
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_7
unknown

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5054..5266
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_8
unknown

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5263..5526
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_9
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5523..6506
DNA (984bp) protein (328aa)
Flagellar biosynthesis protein, initiation of hook assembly n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3K8B8_PSEPF
Flagellar basal body rod modification protein FlgD {ECO:0000313|EMBL:KHA69929.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
flgD; flagellar basal body rod modification protein
13_1_20cm_2_scaffold_4312_10
Streptomyces griseocarneus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6519..7499
DNA (981bp) protein (327aa)
RNA polymerase sigma factor n=1 Tax=Streptomyces griseocarneus RepID=Q06384_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=51201 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseocarneus.;"
RNA polymerase sigma factor WhiG
13_1_20cm_2_scaffold_4312_11
unknown

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comp(7574..7846)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_12
unknown

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7880..8158
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8967..9896
DNA (930bp) protein (310aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_20cm_2_scaffold_4312_14
unknown

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9907..10014
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_15
unknown

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10015..10395
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_16
unknown

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comp(10823..11092)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_4312_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11811..12347
DNA (537bp) protein (179aa)
Type IV pilus assembly protein PilB n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDA5_DEFDS
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type IV pilus assembly protein PilB
13_1_20cm_2_scaffold_4312_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12366..13496
DNA (1131bp) protein (377aa)
Twitching motility protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAD2_GEOLS
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
twitching motility protein
13_1_20cm_2_scaffold_4312_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13506..14723
DNA (1218bp) protein (406aa)
Type II secretion system protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4Y6_GEOUR
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type II secretion system protein
13_1_20cm_2_scaffold_4312_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14758..16392
DNA (1635bp) protein (545aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Multi-sensor signal transduction histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMG1_9BACT
Multi-sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_4312_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16389..17729
DNA (1341bp) protein (447aa)
Regulator protein pilR n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MMW0_BDEBA
pilR; transcriptional regulatory protein pilR; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
regulator protein pilR
13_1_20cm_2_scaffold_4312_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17902..18312
DNA (411bp) protein (137aa)
Putative Fimbrial protein pilin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF8_9BACT
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial protein pilin
13_1_20cm_2_scaffold_4312_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18371..20329
DNA (1959bp) protein (653aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2A23
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_2_scaffold_4312_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20342..21103
DNA (762bp) protein (254aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=GWA2_Rokubacteria_73_35_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E455_GEOLS
peptidase A24A domain-containing protein
13_1_20cm_2_scaffold_4312_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

21076..21267
DNA (192bp) protein (64aa)
Type IV pilus biogenesis protein Tax=CSP1_6_Rokubacteria
Displaying 25 items

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