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13_1_20cm_2_scaffold_523

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_523_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..651)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WIG4_9FLAO
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M10A and M12B matrixin and adamalysin
13_1_20cm_2_scaffold_523_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

697..1962
DNA (1266bp) protein (422aa)
Putative amino acid ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A737_GEMAT
ABC transporter substrate binding protein precursor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative amino acid ABC transporter substrate binding protein
13_1_20cm_2_scaffold_523_3
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

comp(1949..3544)
DNA (1596bp) protein (532aa)
Putative proteophosphoglycan ppg3 n=1 Tax=Leishmania infantum RepID=E9AHU1_LEIIN
WGS CADB00000000 data, contig 74 {ECO:0000313|EMBL:CBZ41017.1}; Flags: Fragment;; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Le
baaA1; trimeric autotransporter adhesin
13_1_20cm_2_scaffold_523_4
unknown

Not on your lists

3845..4120
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_523_5
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(4107..5345)
DNA (1239bp) protein (413aa)
putative oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Chloroflexi_66_10_curated
Putative oxidoreductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1F0_ANATU
putative oxidoreductase
13_1_20cm_2_scaffold_523_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5361..5702)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000365D217
UPF0145 protein Cflav_PD5227 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
hypothetical protein
13_1_20cm_2_scaffold_523_7

Not on your lists

comp(5718..6473)
DNA (756bp) protein (252aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:EQB62873.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
Succinate dehydrogenase subunit B alias=RBG1_452,RBG1_C00001G00452 id=1250010 tax=RBG1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
fumarate reductase iron-sulfur subunit
13_1_20cm_2_scaffold_523_8
unknown

Not on your lists

comp(6475..6570)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_2_scaffold_523_9
unknown

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7112..7384
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_523_10
unknown

Not on your lists

7946..8185
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_2_scaffold_523_11
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..8999)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
integral membrane protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
putative integral membrane protein
13_1_20cm_2_scaffold_523_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9011..9940)
DNA (930bp) protein (310aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
13_1_20cm_2_scaffold_523_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9976..10947)
DNA (972bp) protein (324aa)
Cyclic pyranopterin monophosphate synthase n=6 Tax=Mycobacterium tuberculosis complex RepID=A1KP13_MYCBP
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor biosynthesis protein A 1
13_1_20cm_2_scaffold_523_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10944..11381)
DNA (438bp) protein (146aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdopterin converting factor, large subunit n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QE59_9FIRM
molybdopterin converting factor-like protein
13_1_20cm_2_scaffold_523_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(11423..11671)
DNA (249bp) protein (83aa)
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU7_9BACT
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
thiamine S protein
13_1_20cm_2_scaffold_523_16
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11693..13483)
DNA (1791bp) protein (597aa)
Peptidase M61 domain protein n=2 Tax=Chloroflexus RepID=A9WIA1_CHLAA
Peptidase M61 domain protein {ECO:0000313|EMBL:ABY36393.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorof
peptidase M61 domain-containing protein
13_1_20cm_2_scaffold_523_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13593..13907)
DNA (315bp) protein (105aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_1_20cm_2_scaffold_523_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13964..15043)
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
Carbamoyl-phosphate synthase small chain
13_1_20cm_2_scaffold_523_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15060..15416)
DNA (357bp) protein (119aa)
preprotein translocase subunit SecG n=1 Tax=Salisaeta longa RepID=UPI0003B7BA29
secG; protein-export membrane protein SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
preprotein translocase, SecG subunit
13_1_20cm_2_scaffold_523_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15433..16167)
DNA (735bp) protein (245aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Triosephosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A909_GEMAT
Triosephosphate isomerase, bacterial/eukaryotic
13_1_20cm_2_scaffold_523_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16164..17345)
DNA (1182bp) protein (394aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphoglycerate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT rbh
Phosphoglycerate kinase
13_1_20cm_2_scaffold_523_22
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17342..18352)
DNA (1011bp) protein (337aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RBG_13_Deltaproteobacteria_52_11_curated
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A911_GEMAT
glyceraldehyde-3-phosphate dehydrogenase, type I
13_1_20cm_2_scaffold_523_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18364..18999)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A912_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_523_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19112..19957)
DNA (846bp) protein (282aa)
Shikimate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A913_GEMAT
aroE; shikimate 5-dehydrogenase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Shikimate dehydrogenase
13_1_20cm_2_scaffold_523_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19941..20420)
DNA (480bp) protein (160aa)
protein-tyrosine-phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-tyrosine-phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
13_1_20cm_2_scaffold_523_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20426..21079)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Sua5/YciO/YrdC/YwlC family protein
13_1_20cm_2_scaffold_523_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21076..21780)
DNA (705bp) protein (235aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
13_1_20cm_2_scaffold_523_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21752..23110)
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radA; DNA repair protein RadA
13_1_20cm_2_scaffold_523_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23103..24518)
DNA (1416bp) protein (472aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A918_GEMAT
13_1_20cm_2_scaffold_523_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24481..25281)
DNA (801bp) protein (267aa)
putative DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A919_GEMAT
phage SPO1 DNA polymerase-related protein
Displaying items 1-30 of 36 in total

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