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13_1_20cm_2_scaffold_5600

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5600_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..2394)
DNA (2394bp) protein (798aa)
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
DNA-directed RNA polymerase subunit beta
13_1_20cm_2_scaffold_5600_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2349..4292)
DNA (1944bp) protein (648aa)
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
DNA-directed RNA polymerase subunit beta
13_1_20cm_2_scaffold_5600_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(4399..4800)
DNA (402bp) protein (134aa)
50S ribosomal protein L7/L12 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NPU5_9DELT
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplL; 50S ribosomal protein L7/L12
13_1_20cm_2_scaffold_5600_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(4821..5363)
DNA (543bp) protein (181aa)
50S ribosomal protein L10 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKJ6_DESK7
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWC2_Gemmatimonadetes_71_10_curated
50S ribosomal protein L10
13_1_20cm_2_scaffold_5600_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(5360..6049)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RL1_MOOTA
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein L1
13_1_20cm_2_scaffold_5600_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(6049..6474)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=10 Tax=Thermoanaerobacter RepID=RL11_THEP3
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplK; 50S ribosomal protein L11
13_1_20cm_2_scaffold_5600_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6484..7029)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N2_GEMAT
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination/antitermination factor NusG
13_1_20cm_2_scaffold_5600_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7026..7262)
DNA (237bp) protein (79aa)
secE; preprotein translocase SecE subunit; K03073 preprotein translocase subunit SecE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
secE; preprotein translocase SecE subunit; K03073 preprotein translocase subunit SecE
13_1_20cm_2_scaffold_5600_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(7262..7393)
DNA (132bp) protein (44aa)
50S ribosomal protein L33 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N0_GEMAT
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L33
13_1_20cm_2_scaffold_5600_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7419..8552)
DNA (1134bp) protein (378aa)
Elongation factor Tu n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFTU_GEMAT
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RBG_16_Gemmatimonadetes_66_8_curated
tuf; elongation factor Tu
13_1_20cm_2_scaffold_5600_trna_3
unknown

Not on your lists

comp(8706..8778)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_5600_trna_2
unknown

Not on your lists

comp(8782..8854)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_5600_trna_1
unknown

Not on your lists

comp(9021..9093)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_5600_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9171..10592)
DNA (1422bp) protein (474aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cysteine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L7_GEMAT
Cysteinyl-tRNA synthetase
13_1_20cm_2_scaffold_5600_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10624..11517)
DNA (894bp) protein (298aa)
ABC transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034833CD
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nitrous oxide reductase maturation protein NosF
13_1_20cm_2_scaffold_5600_13
unknown

Not on your lists

comp(11514..12200)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_20cm_2_scaffold_5600_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12278..13351)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A2485 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG90293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF1611
13_1_20cm_2_scaffold_5600_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13351..14478)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQT3_TRURR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function UPF0118
13_1_20cm_2_scaffold_5600_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14502..15266)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein; K03969 phage shock protein A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_2_scaffold_5600_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15294..15689)
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_5600_18
unknown

Not on your lists

comp(15689..15958)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_5600_19
unknown

Not on your lists

comp(15958..16227)
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 22 items

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