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13_1_20cm_2_scaffold_8617

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8617_1
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..597)
DNA (597bp) protein (199aa)
succinate dehydrogenase n=1 Tax=Salinispora arenicola RepID=UPI00037A0961
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family {ECO:0000313|EMBL:ABV97594.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae;
succinate dehydrogenase/fumarate reductase cytochrome b subunit
13_1_20cm_2_scaffold_8617_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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694..1032
DNA (339bp) protein (113aa)
UPF0145 protein PM8797T_29778 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7N6_9PLAN
UPF0145 protein PM8797T_29778 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris D
hypothetical protein
13_1_20cm_2_scaffold_8617_trna_1
unknown

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comp(1165..1248)
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_8617_3
unknown

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1328..2380
DNA (1053bp) protein (351aa)

This feature has no annotations

13_1_20cm_2_scaffold_8617_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2817..4730)
DNA (1914bp) protein (638aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
GAF sensor hybrid histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_8617_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4847..6949
DNA (2103bp) protein (701aa)
Glutamate carboxypeptidase II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P5_GEMAT
Peptidase M28 {ECO:0000313|EMBL:AHG88926.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28
13_1_20cm_2_scaffold_8617_6
unknown

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7000..7428
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_8617_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7709..8950
DNA (1242bp) protein (414aa)
transaldolase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003785EA7
transaldolase
13_1_20cm_2_scaffold_8617_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8961..9395)
DNA (435bp) protein (145aa)
deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Deoxycytidine triphosphate deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
Deoxycytidine triphosphate deaminase
13_1_20cm_2_scaffold_8617_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9558..9941
DNA (384bp) protein (128aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
nuoA; NADH-quinone oxidoreductase chain A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z4_GEMAT
13_1_20cm_2_scaffold_8617_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9949..10554
DNA (606bp) protein (202aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_20cm_2_scaffold_8617_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10551..11171
DNA (621bp) protein (207aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
13_1_20cm_2_scaffold_8617_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11168..12433
DNA (1266bp) protein (422aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
13_1_20cm_2_scaffold_8617_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12430..12924
DNA (495bp) protein (165aa)
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AHG90828.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase, E subunit
13_1_20cm_2_scaffold_8617_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12926..14029
DNA (1104bp) protein (368aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_20cm_2_scaffold_8617_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13987..14151
DNA (165bp) protein (55aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_20cm_2_scaffold_8617_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14151..15746
DNA (1596bp) protein (532aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
13_1_20cm_2_scaffold_8617_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15743..16777
DNA (1035bp) protein (345aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
Displaying 18 items

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