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13_1_20cm_2_scaffold_967

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_967_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2..652
DNA (651bp) protein (217aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=1407055 species="Archaea; Thaum
nnrE; NAD(P)H-hydrate epimerase (EC:5.1.99.6)
Putative YjeF-related protein N-terminal domain n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARZ4_9ARCH
13_1_20cm_2_scaffold_967_2
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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649..1263
DNA (615bp) protein (205aa)
Beta-lactamase domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU50_9ARCH rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:EGP93053.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitro
Beta-lactamase domain protein
13_1_20cm_2_scaffold_967_3

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1282..2322
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003738248 rbh
NaMN:DMB phosphoribosyltransferase {ECO:0000313|EMBL:AIF01239.1}; TaxID=1456010 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_144_G01.;"
hypothetical protein
13_1_20cm_2_scaffold_967_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2315..4075)
DNA (1761bp) protein (587aa)
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) {ECO:0000313|EMBL:CDI05181.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CDI05181.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR40_9ARCH
glucosamine--fructose-6-phosphate aminotransferase
13_1_20cm_2_scaffold_967_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4266..4805)
DNA (540bp) protein (180aa)
30S ribosomal protein S4 n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAW1_9ARCH
rps4p; 30S ribosomal protein S4 Tax=CSP1_1_Thaumarchaeota
rps4p; 30S ribosomal protein S4
13_1_20cm_2_scaffold_967_6

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comp(4843..5376)
DNA (534bp) protein (178aa)
30S ribosomal protein S13P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARZ8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL76339.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps13p; 30S ribosomal protein S13
13_1_20cm_2_scaffold_967_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5462..7096
DNA (1635bp) protein (545aa)
Mg-chelatase subunit ChlI (EC:6.6.1.1)
Mg-chelatase subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARJ6_9ARCH rbh
Mg-chelatase subunit Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_967_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7083..8429
DNA (1347bp) protein (449aa)
Putative von Willebrand factor type A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC1_NITGG
Putative von Willebrand factor type A {ECO:0000313|EMBL:AFU59114.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
von Willebrand factor type A
13_1_20cm_2_scaffold_967_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8459..8743
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0L2_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_967_10
unknown

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comp(8740..8982)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_2_scaffold_967_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9127..12075
DNA (2949bp) protein (983aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4B6_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_20cm_2_scaffold_967_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12092..13249)
DNA (1158bp) protein (386aa)
Putative cysteine desulfurase NifS n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D5F6_9ARCH rbh
cysteine desulfurase Tax=CSP1_1_Thaumarchaeota
cysteine desulfurase
13_1_20cm_2_scaffold_967_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13246..14046)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS10_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI05198.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_967_14

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comp(14043..15275)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2X8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07297.1}; TaxID=1456094 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_201_G04.;"
TIGR00299 family protein
13_1_20cm_2_scaffold_967_15
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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15416..16330
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000255|HAMAP-Rule:MF_00487};; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumil
Malate dehydrogenase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=MDH_NITMS
malate dehydrogenase
13_1_20cm_2_scaffold_967_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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16366..17145
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARP1_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI05195.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_967_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17135..17854)
DNA (720bp) protein (240aa)
Putative integral membrane protein DUF125 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T8A0_9ARCH rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
putative membrane protein
13_1_20cm_2_scaffold_967_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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17961..19526
DNA (1566bp) protein (522aa)
Putative Radical SAM superfamily protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARK4_9ARCH rbh
Putative Radical SAM superfamily protein {ECO:0000313|EMBL:CDI05194.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
radical SAM protein
13_1_20cm_2_scaffold_967_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19519..19854)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T898_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_967_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20003..20974)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B539_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_20cm_2_scaffold_967_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21043..21882)
DNA (840bp) protein (280aa)
Putative copper-binding protein, plastocyanin/azurin family protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUN2_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_20cm_2_scaffold_967_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21955..22848)
DNA (894bp) protein (298aa)
Putative copper-binding protein, plastocyanin/azurin family protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUN2_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_20cm_2_scaffold_967_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22886..24265)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKT1_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_20cm_2_scaffold_967_24
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

24438..24689
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilac
DNA-directed RNA polymerase subunit H n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2G7_9ARCH
RNA polymerase Rpb5
13_1_20cm_2_scaffold_967_25
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

24689..28036
DNA (3348bp) protein (1116aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatu
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUN4_9ARCH rbh
13_1_20cm_2_scaffold_967_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

28038..31832
DNA (3795bp) protein (1265aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumar
Putative DNA-directed RNA polymerase subunit A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ1_9ARCH
bifunctional DNA-directed RNA polymerase subunit A'/A''
13_1_20cm_2_scaffold_967_27
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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31825..32139
DNA (315bp) protein (105aa)
Ribosomal protein L7Ae n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E130_9ARCH
Ribosomal protein L7Ae {ECO:0000313|EMBL:AJW71578.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;
Ribosomal protein L7Ae
13_1_20cm_2_scaffold_967_28
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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32183..32674
DNA (492bp) protein (164aa)
Putative NusA family KH domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ7_9ARCH
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
NusA family protein
13_1_20cm_2_scaffold_967_29

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32681..33118
DNA (438bp) protein (146aa)
30S ribosomal protein S12P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR63_9ARCH
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1455927 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarch
30S ribosomal protein S12
13_1_20cm_2_scaffold_967_30
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists


33122..33721
DNA (600bp) protein (200aa)
30S ribosomal protein S7P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARE4_9ARCH rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
30S ribosomal protein S7
Displaying items 1-30 of 52 in total

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