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13_1_20cm_2_scaffold_15396

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_15396_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2..406
DNA (405bp) protein (135aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361254F
13_1_20cm_2_scaffold_15396_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(381..899)
DNA (519bp) protein (173aa)
Archaemetzincin n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=AMZA_METKA
peptidase zinc-dependent; K06974 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_2_scaffold_15396_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(896..2356)
DNA (1461bp) protein (487aa)
tRNA-splicing ligase RtcB n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM66_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_2_scaffold_15396_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2682..3548)
DNA (867bp) protein (289aa)
Agmatinase n=1 Tax=mine drainage metagenome RepID=T0YEH6_9ZZZZ
agmatinase Tax=RBG_16_Euryarchaeota_67_27_curated
agmatinase
13_1_20cm_2_scaffold_15396_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3592..3978)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
translation initiation factor IF-5A Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor eIF-5A
13_1_20cm_2_scaffold_15396_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4021..5091)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
rRNA biogenesis protein Nop5/Nop56 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative NOP5 family protein
13_1_20cm_2_scaffold_15396_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(5133..6170)
DNA (1038bp) protein (346aa)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL00_ACIS0 rbh
S-methyl-5-thioribose-1-phosphate isomerase Tax=RBG_16_Euryarchaeota_67_27_curated
S-methyl-5-thioribose-1-phosphate isomerase
13_1_20cm_2_scaffold_15396_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6181..6411)
DNA (231bp) protein (77aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_15396_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6414..6641)
DNA (228bp) protein (76aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_15396_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6689..6937)
DNA (249bp) protein (83aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_15396_trna_1
unknown

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7058..7130
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_15396_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7090..8457)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8Z3_9EURY
polysaccharide biosynthesis protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_15396_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8584..8892)
DNA (309bp) protein (103aa)
Putative Cytochrome c oxidase, subunit IV n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENC3_9CHLR
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_15396_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8901..9011)
DNA (111bp) protein (37aa)
ctaE; putative cytochrome c oxidase subunit 3 (EC:1.9.3.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNK7_SINAD
heme/copper-type cytochrome/quinol oxidase, subunit 3
Displaying 14 items

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