ggKbase home page

13_1_20cm_2_scaffold_4101

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4101_1
unknown

Not on your lists

comp(3..212)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_4101_2
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

265..651
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B734_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AJW70754.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
hypothetical protein
13_1_20cm_2_scaffold_4101_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(636..950)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI0003706293
30S ribosomal protein S25 Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S25e
13_1_20cm_2_scaffold_4101_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

1033..1320
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASV7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05801.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_4101_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1440..2588)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PSQ0_METMA
Uncharacterized protein {ECO:0000313|EMBL:AIF83071.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
hypothetical protein
13_1_20cm_2_scaffold_4101_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

2796..4559
DNA (1764bp) protein (588aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
lig; DNA ligase (EC:6.5.1.1)
Putative DNA ligase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT29_9ARCH
13_1_20cm_2_scaffold_4101_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4636..5289
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=K0B9B8_9ARCH rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_4101_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

5368..5901
DNA (534bp) protein (178aa)
endA; tRNA-intron endonuclease (EC:4.6.1.16)
Putative tRNA-splicing endonuclease n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT90_9ARCH
tRNA intron endonuclease Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_4101_9

Not on your lists

comp(5881..6276)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141M12 RepID=B3T5W2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF18330.1}; TaxID=1456304 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_82_D05.;"
hypothetical protein
13_1_20cm_2_scaffold_4101_10
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(6279..6515)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BD80_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFS83027.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
hypothetical protein
13_1_20cm_2_scaffold_4101_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6612..6890
DNA (279bp) protein (93aa)
Rossmann-fold oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT34_9ARCH
short-chain dehydrogenase/reductase SDR Tax=CSP1_1_Thaumarchaeota
short-chain dehydrogenase/reductase SDR
Displaying 11 items

View Taxonomy