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13_1_20cm_3_scaffold_1191

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1191_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1011
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUX7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:BAL24328.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
hypothetical protein
13_1_20cm_3_scaffold_1191_2
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1132..1833
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035C2921
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ECF family RNA polymerase sigma factor
13_1_20cm_3_scaffold_1191_3
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2303..2617
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003716482
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:EDT43602.1}; Flags: Precursor;; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderi
copper binding s, plastocyanin/azurin family protein
13_1_20cm_3_scaffold_1191_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2681..2995
DNA (315bp) protein (105aa)
MtN3 and saliva related transmembrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
transmembrane_regions id=5241306 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_20cm_3_scaffold_1191_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3023..3940)
DNA (918bp) protein (306aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Putative fapy-DNA glycosylase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y5_9BACT
DNA-formamidopyrimidine glycosylase
13_1_20cm_3_scaffold_1191_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3986..4588)
DNA (603bp) protein (201aa)
Carboxymuconolactone decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA21_9BRAD
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EFI50315.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
hypothetical protein
13_1_20cm_3_scaffold_1191_7
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4581..4793)
DNA (213bp) protein (71aa)
Major facilitator superfamily MFS n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ESG0_CUPNN
Major facilitator superfamily MFS {ECO:0000313|EMBL:AEI77970.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavi
major facilitator superfamily protein
13_1_20cm_3_scaffold_1191_8
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4736..5695)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM0_PUSST
Uncharacterized protein {ECO:0000313|EMBL:KIF83807.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
13_1_20cm_3_scaffold_1191_9
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5769..6617
DNA (849bp) protein (283aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4PBN6_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJO31222.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
LysR family transcriptional regulator
13_1_20cm_3_scaffold_1191_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6725..7246
DNA (522bp) protein (174aa)
Putative membrane-anchored protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6JF82_9RHOB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
13_1_20cm_3_scaffold_1191_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7279..7965
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CC41D rbh
two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative two component transcriptional regulator
13_1_20cm_3_scaffold_1191_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7965..9209
DNA (1245bp) protein (415aa)
Two-component signal transduction histidine kinase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PDH7_9BURK rbh
two component sensor histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
two component sensor histidine kinase
13_1_20cm_3_scaffold_1191_13
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9230..9643
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q596_METSZ
Uncharacterized protein {ECO:0000313|EMBL:CCJ08719.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
hypothetical protein
13_1_20cm_3_scaffold_1191_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9822..11489
DNA (1668bp) protein (556aa)
ABC transporter ATP-binding protein; K06020 sulfate-transporting ATPase [EC:3.6.3.25] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ABC transporter ATP-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KJH1_9BURK rbh
ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_1191_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11502..12425
DNA (924bp) protein (308aa)
Putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML3_CUPPJ rbh
putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
13_1_20cm_3_scaffold_1191_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..13058
DNA (525bp) protein (175aa)
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Response regulator receiver domain protein (CheY) id=1335688 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
response regulator receiver protein
13_1_20cm_3_scaffold_1191_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..14225
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E73_MESSB rbh
zinc-binding alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
zinc-binding alcohol dehydrogenase
13_1_20cm_3_scaffold_1191_18
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14222..15367
DNA (1146bp) protein (382aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002ED2137 rbh
vitamin-B12 independent methionine synthase
13_1_20cm_3_scaffold_1191_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..15651
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIB4_AZOSU
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_20cm_3_scaffold_1191_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15665..16114)
DNA (450bp) protein (150aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=24599981 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Displaying 20 items

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