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13_1_20cm_3_scaffold_457

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_457_trna_1
unknown

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comp(7..80)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_457_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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220..708
DNA (489bp) protein (163aa)
Allergen V5/Tpx-1 related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYU6_RUBXD
Allergen V5/Tpx-1 related {ECO:0000313|EMBL:ABG03432.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobac
allergen V5/Tpx-1-like protein
13_1_20cm_3_scaffold_457_2
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(705..1142)
DNA (438bp) protein (146aa)
Response regulator n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D153_PELTS
Response regulator {ECO:0000313|EMBL:BAF60012.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strai
OmpR; response regulator
13_1_20cm_3_scaffold_457_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1139..5080)
DNA (3942bp) protein (1314aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHH5_ROSCS
two-component sensor histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_3_scaffold_457_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5595..6476
DNA (882bp) protein (294aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F288_CONWI
13_1_20cm_3_scaffold_457_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(6477..7682)
DNA (1206bp) protein (402aa)
glutamate--cysteine ligase; K06048 carboxylate-amine ligase [EC:6.3.-.-] Tax=RBG_16_Actinobacteria_68_12_curated
Carboxylate-amine ligase Cwoe_5230 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEE4_CONWI
glutamate--cysteine ligase
13_1_20cm_3_scaffold_457_6
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7714..7992)
DNA (279bp) protein (93aa)
Endoribonuclease L-PSP n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTC8_9EURY
endoribonuclease L-PSP Tax=RBG_16_Actinobacteria_70_17_curated
endoribonuclease L-PSP
13_1_20cm_3_scaffold_457_7
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8121..8945
DNA (825bp) protein (275aa)
Beta-lactamase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4A6_STREN
Beta-lactamase {ECO:0000313|EMBL:EFL06555.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Beta-lactamase
13_1_20cm_3_scaffold_457_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9232..11070
DNA (1839bp) protein (613aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JCC1_FRASU
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:ADP84710.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp.
hypothetical protein
13_1_20cm_3_scaffold_457_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(11067..11450)
DNA (384bp) protein (128aa)
Egg laying defective protein 4, isoform c; K07376 protein kinase, cGMP-dependent [EC:2.7.11.12] Tax=RBG_16_Actinobacteria_68_12_curated
Putative Xenobiotic-transporting ATPase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJB2_9CHLR
mscS Mechanosensitive ion channel
13_1_20cm_3_scaffold_457_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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11534..12046
DNA (513bp) protein (171aa)
NUDIX hydrolase Tax=RBG_16_Actinobacteria_68_12_curated
NUDIX hydrolase id=4388290 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ADP-ribose pyrophosphatase
13_1_20cm_3_scaffold_457_11
unknown

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comp(12017..12370)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_3_scaffold_457_12
unknown

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12798..12980
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_457_13
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13024..13545
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V4E4_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EMY34942.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
hypothetical protein
13_1_20cm_3_scaffold_457_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13542..13874)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Kocuria palustris PEL RepID=M2XD38_9MICC
trxA; thioredoxin Tax=RBG_16_Actinobacteria_68_12_curated
thioredoxin
13_1_20cm_3_scaffold_457_15
GWE1_OP11_38_10, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

13954..14184
DNA (231bp) protein (77aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=14628933 bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:KKQ49054.1}; TaxID=1618488 species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWE1_38_10.;"
Displaying 16 items

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