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13_1_20cm_3_scaffold_6018

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_6018_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003605ED2
Uncharacterized protein {ECO:0000313|EMBL:KGT78721.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
13_1_20cm_3_scaffold_6018_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(748..1551)
DNA (804bp) protein (268aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=358220 species="Bacteria; Prote
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYT0_9BURK
13_1_20cm_3_scaffold_6018_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1553..2854)
DNA (1302bp) protein (434aa)
Putative TRAP-type C4-dicarboxylate transporter, large permease subunit (DctM) n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHA9_MOBAS rbh
TRAP dicarboxylate transporter subunit DctM Tax=RBG_16_Betaproteobacteria_66_20_curated
TRAP dicarboxylate transporter subunit DctM
13_1_20cm_3_scaffold_6018_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2851..3369)
DNA (519bp) protein (173aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPR2_9RHIZ
tripartite ATP-independent periplasmic transporter DctQ Tax=RBG_16_Betaproteobacteria_66_20_curated
TRAP C4-dicarboxylate transport system permease DctM
13_1_20cm_3_scaffold_6018_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3433..4422)
DNA (990bp) protein (330aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J3DCC6_9BURK rbh
TRAP dicarboxylate transporter subunit DctP Tax=RBG_16_Betaproteobacteria_66_20_curated
TRAP dicarboxylate transporter subunit DctP
13_1_20cm_3_scaffold_6018_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4470..5306)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003675EF1
Uncharacterized protein {ECO:0000313|EMBL:BAL27415.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
hypothetical protein
13_1_20cm_3_scaffold_6018_7
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5303..7075)
DNA (1773bp) protein (591aa)
Putative acetohydroxyacid synthase large subunit {ECO:0000313|EMBL:ADF37815.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ADF37815.1};; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae;
acetohydroxyacid synthase large subunit (EC:2.2.1.6)
acetohydroxyacid synthase large subunit n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002F5571A rbh
13_1_20cm_3_scaffold_6018_8
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7125..8573)
DNA (1449bp) protein (483aa)
aldehyde dehydrogenase n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003786FC8 rbh
NAD-dependent aldehyde dehydrogenase Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
NAD-dependent aldehyde dehydrogenase
13_1_20cm_3_scaffold_6018_9
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8720..9055)
DNA (336bp) protein (112aa)
polymerase n=1 Tax=Chryseobacterium taeanense RepID=UPI000379A30E
Porin {ECO:0000313|EMBL:EON13797.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
13_1_20cm_3_scaffold_6018_10
unknown

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comp(9042..9158)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_20cm_3_scaffold_6018_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9344..9700
DNA (357bp) protein (119aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|H
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI00037BDF60
13_1_20cm_3_scaffold_6018_12
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9809..10579
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003715137
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AGW94465.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstoni
4-hydroxyphenylpyruvate dioxygenase
13_1_20cm_3_scaffold_6018_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11255
DNA (645bp) protein (215aa)
nucleoside-diphosphate-sugar epimerase (EC:1.1.1.61) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037DFE46
NAD-dependent epimerase/dehydratase
Displaying 13 items

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