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13_1_20cm_3_scaffold_1075

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1075_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(95..1057)
DNA (963bp) protein (321aa)
NLP/P60 protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPM3_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63320.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
nlp/p60 protein
13_1_20cm_3_scaffold_1075_2
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1358..2242)
DNA (885bp) protein (295aa)
ABC transporter n=1 Tax=Salinispora pacifica RepID=UPI00036A57B2
ABC transporter related {ECO:0000313|EMBL:ABP52920.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
ABC transporter-like protein
13_1_20cm_3_scaffold_1075_3
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2639..2893
DNA (255bp) protein (85aa)
DNA mismatch repair protein MutS n=1 Tax=Salinispora pacifica RepID=UPI0002DE1DFC
Uncharacterized protein {ECO:0000313|EMBL:ABP52852.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
hypothetical protein
13_1_20cm_3_scaffold_1075_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2886..3767)
DNA (882bp) protein (294aa)
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AEV85467.1}; EC=1.5.99.11 {ECO:0000313|EMBL:AEV85467.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae
putative F420-dependent oxidoreductase (EC:1.5.99.11)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003806251 rbh
13_1_20cm_3_scaffold_1075_5

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comp(3764..4486)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037E15E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL75451.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_1075_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4574..4912)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000370B09F
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERK71408.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1466
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_1075_7
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5507..6394)
DNA (888bp) protein (296aa)
NAD dependent epimerase/dehydratase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W8V7_9ACTO rbh
NAD dependent epimerase/dehydratase {ECO:0000313|EMBL:EFL24795.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatini
3-beta hydroxysteroid dehydrogenase
13_1_20cm_3_scaffold_1075_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6507..7523
DNA (1017bp) protein (339aa)
LysR family transcriptional regulator n=1 Tax=Streptomyces sp. e14 RepID=D6KE70_9ACTO rbh
LysR family transcription regulator {ECO:0000313|EMBL:AHH96834.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 438
LysR family transcription regulator
13_1_20cm_3_scaffold_1075_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7483..8703)
DNA (1221bp) protein (407aa)
extracellular repeat-containing protein, HAF family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Extracellular HAF id=4359035 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular repeat-containing protein, HAF family
13_1_20cm_3_scaffold_1075_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8861..11659)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FKV5_SACEN rbh
LuxR family transcription regulator {ECO:0000313|EMBL:AHH96906.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 438
LuxR family transcription regulator
13_1_20cm_3_scaffold_1075_11
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11808..13277
DNA (1470bp) protein (490aa)
Secreted glucosidase n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QZ26_9ACTO rbh
1,3-beta-glucanase {ECO:0000313|EMBL:KJK47658.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
secreted glucosidase rbh
13_1_20cm_3_scaffold_1075_12
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13337..13660
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7B149_NOCDD
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218
thioredoxin
13_1_20cm_3_scaffold_1075_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13657..14613)
DNA (957bp) protein (319aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RXI7_MICSL rbh
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:ADL45547.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora auran
thij/pfpi domain-containing protein
13_1_20cm_3_scaffold_1075_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14685..15068
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036CF7F9
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CEL12869.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium
rhodanese domain-containing protein
13_1_20cm_3_scaffold_1075_15
unknown

Not on your lists

comp(15069..15197)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_3_scaffold_1075_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15314..16363)
DNA (1050bp) protein (350aa)
Glycoside hydrolase family 28 n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P5C8_STRVO
Exo-poly-alpha-D-galacturonosidase {ECO:0000313|EMBL:EWM13348.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
glycoside hydrolase
Displaying 16 items

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