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13_1_20cm_3_scaffold_15088

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_15088_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_20cm_3_scaffold_15088_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(185..796)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00036B3A22
Uncharacterized protein {ECO:0000313|EMBL:BAL92765.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
hypothetical protein
13_1_20cm_3_scaffold_15088_3
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(841..1494)
DNA (654bp) protein (218aa)
rRNA methyltransferase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000380FB7C
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABP53210.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (str
tRNA/rRNA methyltransferase SpoU
13_1_20cm_3_scaffold_15088_4
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1506..2006)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000371925A
Uncharacterized protein {ECO:0000313|EMBL:CCH15872.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_3_scaffold_15088_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2057..2566)
DNA (510bp) protein (170aa)
Dehydratase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RN34_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66737.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
MaoC domain-containing protein dehydratase
13_1_20cm_3_scaffold_15088_6
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3215..3574
DNA (360bp) protein (120aa)
Thioredoxin n=2 Tax=Salinispora tropica RepID=A4X2V7_SALTO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DS
thioredoxin
13_1_20cm_3_scaffold_15088_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3835..5556
DNA (1722bp) protein (574aa)
Radical SAM domain protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RXE1_MICSL rbh
Radical SAM family FeS protein {ECO:0000313|EMBL:EWM66136.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
radical sam domain-containing protein
13_1_20cm_3_scaffold_15088_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5553..5984
DNA (432bp) protein (144aa)
CoA-binding domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F263_VERMA
CoA-binding domain-containing protein {ECO:0000313|EMBL:AEB42752.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora mar
CoA-binding domain-containing protein
13_1_20cm_3_scaffold_15088_9
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5944..6237)
DNA (294bp) protein (98aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X2V4_SALTO
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABP53204.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_15088_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6547..6852
DNA (306bp) protein (102aa)
Transcription factor Tcf4 variant S9 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TG4_STIAD
Transcription factor Tcf4 variant S9 {ECO:0000313|EMBL:EAU63761.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;
13_1_20cm_3_scaffold_15088_11
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6854..7006)
DNA (153bp) protein (51aa)
Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Streptomyces sp. AA4 RepID=D9V6X9_9ACTO
Cyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:EFL05072.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_15088_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7129..7494
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003792BDC
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EWM66143.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M
hypothetical protein
13_1_20cm_3_scaffold_15088_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7498..8286)
DNA (789bp) protein (263aa)
short-chain dehydrogenase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003601F01
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADL44244.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora a
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_15088_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8479..9069
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8RXD4_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ADL44243.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
hypothetical protein
13_1_20cm_3_scaffold_15088_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9045..10019)
DNA (975bp) protein (325aa)
citryl-CoA lyase (EC:4.1.3.34)
citrate (pro-3S)-lyase n=1 Tax=Salinispora pacifica RepID=UPI00037F0F65 rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64986.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
13_1_20cm_3_scaffold_15088_16
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10088..10903
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEV82629.1}; EC=1.1.1.- {ECO:0000313|EMBL:AEV82629.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae;
short-chain dehydrogenase/reductase SDR (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S9T5_ACTS5
13_1_20cm_3_scaffold_15088_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10898..11809)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWA9_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64982.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_1_20cm_3_scaffold_15088_18
unknown

Not on your lists

12431..12601
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_3_scaffold_15088_19
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12516..13085)
DNA (570bp) protein (190aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B n=2 Tax=Micromonospora RepID=D9SY96_MICAI rbh
13_1_20cm_3_scaffold_15088_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13095..13385)
DNA (291bp) protein (97aa)
methylated-DNA-protein-cysteine methyltransferase n=1 Tax=Actinoplanes globisporus RepID=UPI000376D7EC
Putative 6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AGZ39122.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinopl
putative 6-O-methylguanine DNA methyltransferase
13_1_20cm_3_scaffold_15088_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13440..14537
DNA (1098bp) protein (366aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCC9_9ACTO
13_1_20cm_3_scaffold_15088_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14545..15642)
DNA (1098bp) protein (366aa)
UPI0003C7FC51 related cluster n=1 Tax=unknown RepID=UPI0003C7FC51 rbh
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
Displaying 22 items

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