ggKbase home page

13_1_20cm_3_scaffold_1643

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1643_1
unknown

Not on your lists

2..112
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_20cm_3_scaffold_1643_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87..1364)
DNA (1278bp) protein (426aa)
Geranylgeranyl reductase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV52_9ACTO rbh
Geranylgeranyl reductase {ECO:0000313|EMBL:CCH15449.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lup
putative FAD-dependent oxidoreductase
13_1_20cm_3_scaffold_1643_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1428..2156)
DNA (729bp) protein (243aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosp
Demethylmenaquinone methyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCL5_VERMA
ubiquinone/menaquinone biosynthesis methyltransferase
13_1_20cm_3_scaffold_1643_4
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2153..3310)
DNA (1158bp) protein (386aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
FO synthase subunit 2 n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV46_9ACTO rbh
radical sam domain-containing protein
13_1_20cm_3_scaffold_1643_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3339..4808)
DNA (1470bp) protein (490aa)
filamentation induced by cAMP protein fic Tax=GWC2_RIF_CHLX_73_18_curated
Filamentation induced by cAMP protein Fic id=3599066 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
filamentation induced by cAMP protein fic
13_1_20cm_3_scaffold_1643_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4868..5629)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035E1837
Acetyltransferase {ECO:0000313|EMBL:AIE85270.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli
acetyltransferase
13_1_20cm_3_scaffold_1643_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5680..6633
DNA (954bp) protein (318aa)
aldo/keto reductase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000362277F rbh
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EWM67483.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospor
aldo/keto reductase
13_1_20cm_3_scaffold_1643_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6669..7391)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCS0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ45800.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_3_scaffold_1643_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7388..7975)
DNA (588bp) protein (196aa)
RNA polymerase sigma factor sigK n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCY7_9ACTO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS
RNA polymerase sigma factor sigK
13_1_20cm_3_scaffold_1643_10
Streptomyces ambofaciens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8016..9017)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037949DF
Putative phenylacetic acid degradation NADH oxidoreductase PaaE {ECO:0000313|EMBL:CAJ89632.1}; TaxID=278992 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sour
phenylacetate-CoA oxygenase/reductase subunit PaaK
13_1_20cm_3_scaffold_1643_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9014..9247)
DNA (234bp) protein (78aa)
Phenylacetate-CoA oxygenase, paaj subunit n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCL1_VERMA
Phenylacetate-CoA oxygenase, paaj subunit {ECO:0000313|EMBL:AEB42338.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora
phenylacetate-CoA oxygenase, paaj subunit
Displaying 11 items

View Taxonomy