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13_1_20cm_3_scaffold_2770

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2770_1
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1038
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000360837C rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG89418.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993
hypothetical protein rbh
13_1_20cm_3_scaffold_2770_2
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1040..1702)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X413_SALTO rbh
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABP53613.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinisp
HAD family hydrolase rbh
13_1_20cm_3_scaffold_2770_3
unknown

Not on your lists

1768..1941
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_3_scaffold_2770_trna_2
unknown

Not on your lists

comp(1971..2044)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_2770_trna_1
unknown

Not on your lists

comp(2114..2184)
DNA (71bp)
transferRNA
13_1_20cm_3_scaffold_2770_4
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2336..2665
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0C0_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:BAL86457.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
hypothetical protein
13_1_20cm_3_scaffold_2770_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2717..3535)
DNA (819bp) protein (273aa)
ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSY5_9ACTO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM
ABC transporter permease
13_1_20cm_3_scaffold_2770_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3547..4314)
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA17_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str.
ABC transporter
13_1_20cm_3_scaffold_2770_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4314..5240)
DNA (927bp) protein (309aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0A9_ACTM4 rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL86446.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes
putative ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_2770_8
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5273..5776)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S0U6_MICSL
Uncharacterized protein {ECO:0000313|EMBL:EWM68176.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_2770_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5773..7602)
DNA (1830bp) protein (610aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=644283 species="Bacteria; Actinobacter
DNA primase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S0U5_MICSL rbh
DNA primase
13_1_20cm_3_scaffold_2770_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7720..8724
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RWI6_MICSL rbh
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:EXG81280.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryp
hypothetical protein
13_1_20cm_3_scaffold_2770_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8721..9806
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8RWI5_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ADL45498.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
hypothetical protein
13_1_20cm_3_scaffold_2770_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10181..10456
DNA (276bp) protein (92aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; A
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036F5DC0
FKBP-type peptidylprolyl isomerase
13_1_20cm_3_scaffold_2770_13
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10511..12397)
DNA (1887bp) protein (629aa)
Glycoside hydrolase family protein {ECO:0000313|EMBL:KDN80985.1}; EC=3.2.1.4 {ECO:0000313|EMBL:KDN80985.1};; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitas
Glycoside hydrolase family 9 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7V0_CATAD
glycoside hydrolase family protein
13_1_20cm_3_scaffold_2770_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12632..14068
DNA (1437bp) protein (479aa)
Ricin B lectin n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6J0_CATAD
Ricin B lectin {ECO:0000313|EMBL:ACU74025.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
ricin B lectin
13_1_20cm_3_scaffold_2770_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14156..14740
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003650591
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADG89200.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain AT
N-acetyltransferase GCN5
13_1_20cm_3_scaffold_2770_16
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14910..15578)
DNA (669bp) protein (223aa)
Regulatory protein, TetR n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FB46_VERMA
Regulatory protein, TetR {ECO:0000313|EMBL:AEB47191.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB
TetR family transcriptional regulator
13_1_20cm_3_scaffold_2770_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15736..16551
DNA (816bp) protein (272aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QD34_CATAD
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACU70744.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphil
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_2770_18
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16593..17564
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JG50_STRRC rbh
Uncharacterized protein {ECO:0000313|EMBL:EST18663.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
hypothetical protein
13_1_20cm_3_scaffold_2770_19
unknown

Not on your lists

17614..18012
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_3_scaffold_2770_20
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18034..18783
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00035D9288
Uncharacterized protein {ECO:0000313|EMBL:EWT03334.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
13_1_20cm_3_scaffold_2770_21
unknown

Not on your lists

18846..19070
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_3_scaffold_2770_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19057..20310)
DNA (1254bp) protein (418aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X987_NAKMY
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACV77155.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakam
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_3_scaffold_2770_23
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20320..21564)
DNA (1245bp) protein (415aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNQ3_9ACTO rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;"
deoxyguanosinetriphosphate triphosphohydrolase
13_1_20cm_3_scaffold_2770_24
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21581..21937)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VW15_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ39920.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_3_scaffold_2770_25
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21992..22465)
DNA (474bp) protein (158aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T9F0_MICAI
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EWM68167.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
Displaying 27 items

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