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13_1_20cm_3_scaffold_4293

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4293_1
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2598)
DNA (2598bp) protein (866aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; C
protein kinase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036A6DBB
serine/threonine kinase with signal transduction histidinekinase and gaf sensor
13_1_20cm_3_scaffold_4293_2
unknown

Not on your lists

2642..3550
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_20cm_3_scaffold_4293_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3582..5804)
DNA (2223bp) protein (741aa)
Alpha-L-fucosidase/alpha-galactosidase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TB37_AMYOR rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:ETK32284.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alpha-L-fucosidase/alpha-galactosidase
13_1_20cm_3_scaffold_4293_4
unknown

Not on your lists

5980..6567
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_3_scaffold_4293_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6571..8250)
DNA (1680bp) protein (560aa)
sodium:solute symporter n=1 Tax=Actinomadura flavalba RepID=UPI00036337B3
Sodium:solute symporter {ECO:0000313|EMBL:ETK37615.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
monocarboxylic acid permease
13_1_20cm_3_scaffold_4293_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8252..8437)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EV91_MODMB
Uncharacterized protein {ECO:0000313|EMBL:CCH87304.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain
hypothetical protein
13_1_20cm_3_scaffold_4293_7
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8434..10062)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037ADF06
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KDS85513.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Strept
hypothetical protein
13_1_20cm_3_scaffold_4293_8
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10231..11310
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003809480
Uncharacterized protein {ECO:0000313|EMBL:KDS85514.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces ros
two-component system sensor kinase
13_1_20cm_3_scaffold_4293_9
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11473..11850
DNA (378bp) protein (126aa)
LuxR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627680
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDS85515.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (St
liaR; response regulator, two-component system
13_1_20cm_3_scaffold_4293_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12574..13719
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F5G9_VERMA rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEB43001.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verruco
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_4293_11
unknown

Not on your lists

13725..14258
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_4293_12
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14295..15323)
DNA (1029bp) protein (343aa)
ABC transporter, substrate-binding protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JVR2_STREN rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AEW96972.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cat
ABC transporter substrate-binding protein rbh
13_1_20cm_3_scaffold_4293_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15341..16171)
DNA (831bp) protein (277aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF73_RHOPT rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACE99507.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
ABC transporter inner membrane protein
13_1_20cm_3_scaffold_4293_14
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16183..16986)
DNA (804bp) protein (268aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JVR0_STREN rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEW96969.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (
ABC transporter ATP-binding protein rbh
13_1_20cm_3_scaffold_4293_15
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17152..18756
DNA (1605bp) protein (535aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" so
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K0S5_STRRC rbh
signal transduction histidine kinase regulating citrate/malate metabolism
13_1_20cm_3_scaffold_4293_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18753..19421
DNA (669bp) protein (223aa)
Transcriptional regulatory protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAY5_CATAD
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphi
response regulator receiver
13_1_20cm_3_scaffold_4293_17
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19406..22690)
DNA (3285bp) protein (1095aa)
Transcriptional regulator, LuxR family n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P4H6_STRVO
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEM83714.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceu
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_4293_18
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22768..25500)
DNA (2733bp) protein (911aa)
Uncharacterized protein n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZG85_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPH42666.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
LuxR family transcriptional regulator rbh
13_1_20cm_3_scaffold_4293_19
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25720..27150
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037AA9BF
Uncharacterized protein {ECO:0000313|EMBL:ETK37515.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
glycoside hydrolase family protein
Displaying 19 items

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