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13_1_20cm_3_scaffold_5093

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5093_1
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1592)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035F3EDC
Putative drug exporter of the RND superfamily {ECO:0000313|EMBL:AEK43720.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatops
putative drug exporter of the RND superfamily
13_1_20cm_3_scaffold_5093_2
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1713..2348
DNA (636bp) protein (212aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2U8_VERMA rbh
lipoate-protein ligase B rbh
13_1_20cm_3_scaffold_5093_3
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2365..2883)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000373CC0C
Uncharacterized protein {ECO:0000313|EMBL:AJT62124.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein
13_1_20cm_3_scaffold_5093_4
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3021..4235)
DNA (1215bp) protein (405aa)
tRNA synthetase class II (D K and N) n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T7D4_MICAI rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EWM68375.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
tRNA synthetase class II (D K and N)
13_1_20cm_3_scaffold_5093_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4310..5524)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035E44F6 rbh
Luciferase family protein {ECO:0000313|EMBL:AGZ40562.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 73
luciferase family protein
13_1_20cm_3_scaffold_5093_6
unknown

Not on your lists

comp(5545..6453)
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_20cm_3_scaffold_5093_7
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6572..7438
DNA (867bp) protein (289aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
lipoic acid synthetase (EC:2.8.1.8)
radical SAM protein n=1 Tax=Salinispora arenicola RepID=UPI00036D7E44
13_1_20cm_3_scaffold_5093_8
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7428..8582)
DNA (1155bp) protein (385aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9VUE2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDN85343.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC
low temperature requirement A
13_1_20cm_3_scaffold_5093_9
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8619..9308
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RMK5_9ACTO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71004.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_1_20cm_3_scaffold_5093_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10423..10869
DNA (447bp) protein (149aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora
Glutamine synthetase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2V4_VERMA
type I glutamine synthetase
13_1_20cm_3_scaffold_5093_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11275..12567)
DNA (1293bp) protein (431aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI3_9CHLR rbh
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH90000.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
putative ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_5093_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12587..12952)
DNA (366bp) protein (122aa)
YCII-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCI2_9CHLR
YCII-related protein {ECO:0000313|EMBL:EFH89999.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
DGPF domain-containing protein
13_1_20cm_3_scaffold_5093_13
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13390..15336)
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036635A6 rbh
Glycosyl hydrolase {ECO:0000313|EMBL:EFG10181.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27
glycosyl hydrolase family protein
13_1_20cm_3_scaffold_5093_14
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15422..16345)
DNA (924bp) protein (308aa)
DNA-binding protein n=1 Tax=Salinispora pacifica RepID=UPI00036F1062 rbh
DNA-binding protein {ECO:0000313|EMBL:EWM68296.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
helix-turn-helix domain-containing protein
13_1_20cm_3_scaffold_5093_15
unknown

Not on your lists

16515..16745
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_3_scaffold_5093_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16705..17196)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NTJ7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK30644.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_20cm_3_scaffold_5093_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17269..17643)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003720AE8
Twitching motility protein PilT {ECO:0000313|EMBL:ETK33655.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC
PilT protein domain-containing protein
13_1_20cm_3_scaffold_5093_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17640..17897)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003693003
Prevent-host-death protein {ECO:0000313|EMBL:ETK33654.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5
prevent-host-death family protein
13_1_20cm_3_scaffold_5093_19
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17949..19646)
DNA (1698bp) protein (566aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromono
Putative glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0N9_ACTM4
putative glutamate-ammonia-ligase adenylyltransferase
Displaying 19 items

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