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13_1_20cm_3_scaffold_555

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_555_1
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..619
DNA (618bp) protein (206aa)
GCN5-related N-acetyltransferase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYL6_9ACTO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCH16663.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini
GCN5-like N-acetyltransferase
13_1_20cm_3_scaffold_555_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(566..1324)
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dihydrodipicolinate reductase (EC:1.3.1.26) rbh
dihydrodipicolinate reductase n=1 Tax=Salinispora arenicola RepID=UPI00036B5633 rbh
13_1_20cm_3_scaffold_555_3
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1390..2649)
DNA (1260bp) protein (420aa)
Peptidase M16 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RD80_9ACTO rbh
Peptidase M16 {ECO:0000313|EMBL:EEP74032.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
peptidase M16 domain-containing protein rbh
13_1_20cm_3_scaffold_555_4
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2670..4976)
DNA (2307bp) protein (769aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
polynucleotide phosphorylase n=1 Tax=Salinispora arenicola RepID=UPI000379C6EF
13_1_20cm_3_scaffold_555_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5178..5447)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Longispora albida RepID=UPI00037EABB1
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sourc
30S ribosomal protein S15
13_1_20cm_3_scaffold_555_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5586..6509)
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1150864 species="Bacteria; Actinobacte
riboflavin kinase n=1 Tax=Salinispora pacifica RepID=UPI00036C4524 rbh
riboflavin biosynthesis protein RibF
13_1_20cm_3_scaffold_555_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6514..7416)
DNA (903bp) protein (301aa)
Cell wall hydrolase/autolysin n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1H2_THECD
Cell wall hydrolase {ECO:0000313|EMBL:ETK35664.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
cell wall hydrolase/autolysin
13_1_20cm_3_scaffold_555_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7413..8303)
DNA (891bp) protein (297aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=2 Tax=Micromonospora RepID=D9SXU5_MICAI rbh
tRNA pseudouridine synthase b rbh
13_1_20cm_3_scaffold_555_9
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8326..9576)
DNA (1251bp) protein (417aa)
multidrug transporter MatE n=1 Tax=Salinispora arenicola RepID=UPI00036CECBB
MATE efflux family protein {ECO:0000313|EMBL:ABV97235.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CN
MATE efflux family protein
13_1_20cm_3_scaffold_555_10
unknown

Not on your lists

comp(9636..9731)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_3_scaffold_555_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9981..11000)
DNA (1020bp) protein (340aa)
Phosphoesterase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBP6_VERMA
Phosphoesterase domain-containing protein {ECO:0000313|EMBL:AEB43508.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora
phosphoesterase domain-containing protein
13_1_20cm_3_scaffold_555_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10997..11458)
DNA (462bp) protein (154aa)
Ribosome-binding factor A n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBP5_VERMA
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" sou
rbfA; ribosome-binding factor A
13_1_20cm_3_scaffold_555_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11513..11806)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBP4_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AEB43506.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
hypothetical protein
13_1_20cm_3_scaffold_555_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11827..12816)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S9U4_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ADL45029.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
hypothetical protein
13_1_20cm_3_scaffold_555_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12855..14174)
DNA (1320bp) protein (440aa)
translation initiation factor IF-2 n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035EA93D
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora car
translation initiation factor IF-2
13_1_20cm_3_scaffold_555_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14263..15576
DNA (1314bp) protein (438aa)
Translation initiation factor IF-2 domain protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L9M6_NOCAA
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:EWC62818.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineo
infB; translation initiation factor IF-2 domain protein
13_1_20cm_3_scaffold_555_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16055..17155)
DNA (1101bp) protein (367aa)
Transcription elongation factor NusA n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBP1_VERMA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" sourc
nusA; transcription elongation factor NusA
13_1_20cm_3_scaffold_555_18
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17152..17763)
DNA (612bp) protein (204aa)
ribosome maturation factor RimP n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00035C5558
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.
hypothetical protein
13_1_20cm_3_scaffold_555_19
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17872..18336
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8S9T9_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ADL45025.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
hypothetical protein
13_1_20cm_3_scaffold_555_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18333..18752
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036C3C69
Uncharacterized protein {ECO:0000313|EMBL:CCH16636.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_3_scaffold_555_21
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19235..19477
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000379E141
GntR family transcriptional regulator {ECO:0000313|EMBL:EWM66665.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp.
GntR family transcriptional regulator
13_1_20cm_3_scaffold_555_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19531..20187
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000379CB94
Uncharacterized protein {ECO:0000313|EMBL:CCH16631.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_3_scaffold_555_23
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20196..20864)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037B86F5
Integral membrane protein {ECO:0000313|EMBL:EWM65372.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_555_24
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20896..21423)
DNA (528bp) protein (176aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HGQ4_ACTM4
putative methionine aminopeptidase
13_1_20cm_3_scaffold_555_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21709..22419)
DNA (711bp) protein (237aa)
peptidase C26 n=1 Tax=Actinoplanes globisporus RepID=UPI0003712520
Putative glutamine amidotransferase {ECO:0000313|EMBL:AGZ45463.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friulien
putative glutamine amidotransferase
13_1_20cm_3_scaffold_555_26
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22499..23023)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00038165F7
Uncharacterized protein {ECO:0000313|EMBL:ADD44753.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
hypothetical protein
13_1_20cm_3_scaffold_555_27
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23097..23966)
DNA (870bp) protein (290aa)
N-acetyltransferase GCN5 n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000366DF70 rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EWM65401.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
GCN5-like N-acetyltransferase
13_1_20cm_3_scaffold_555_28
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24053..24607
DNA (555bp) protein (185aa)
Putative PadR-like family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8E7_9ACTO
Putative PadR-like family transcriptional regulator {ECO:0000313|EMBL:AGZ45483.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actin
putative PadR-like family transcriptional regulator
13_1_20cm_3_scaffold_555_29
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24668..25270)
DNA (603bp) protein (201aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035C94C7
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Displaying 29 items

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