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13_1_20cm_3_scaffold_5581

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5581_1
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..668
DNA (666bp) protein (222aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDG9_MICAI
13_1_20cm_3_scaffold_5581_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


670..2337
DNA (1668bp) protein (556aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F2L2_VERMA rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61919.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
selenocysteine-specific translation elongation factor
13_1_20cm_3_scaffold_5581_3
unknown

Not on your lists

2460..3443
DNA (984bp) protein (328aa)

This feature has no annotations

13_1_20cm_3_scaffold_5581_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3582..6179
DNA (2598bp) protein (866aa)
Glycoside hydrolase family 3 protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4L432_9ACTO
Glycoside hydrolase family 3 protein {ECO:0000313|EMBL:AGL14242.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902
bglK; Glycoside hydrolase family 3 protein
13_1_20cm_3_scaffold_5581_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6266..6769
DNA (504bp) protein (168aa)
Carbohydrate-binding protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IAN2_9PSEU
Lipoprotein {ECO:0000313|EMBL:EWM15975.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
carbohydrate-binding protein
13_1_20cm_3_scaffold_5581_6
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6878..7543)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI00038307B1
Uncharacterized protein {ECO:0000313|EMBL:CDR06674.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
13_1_20cm_3_scaffold_5581_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7540..8130)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Rhodnius prolixus RepID=T1IAF4_RHOPR
Uncharacterized protein {ECO:0000313|EMBL:KJC36691.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
ovarian cancer-associated gene 2 protein homolog
13_1_20cm_3_scaffold_5581_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8130..8528)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000366E7D2
Uncharacterized protein {ECO:0000313|EMBL:KJQ55920.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
13_1_20cm_3_scaffold_5581_9
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8600..9511
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00035D5CD4 rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV99443.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicol
LysR family transcriptional regulator
13_1_20cm_3_scaffold_5581_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9660..10301
DNA (642bp) protein (214aa)
Two-component transcriptional regulatory protein dosR n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ95_9ACTO
Two-component transcriptional regulatory protein dosR {ECO:0000313|EMBL:CCH16892.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="M
two component LuxR family transcriptional regulator
13_1_20cm_3_scaffold_5581_11
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10322..11290)
DNA (969bp) protein (323aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intraspora
phosphoketolase (EC:4.1.2.9)
phosphoketolase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003656062
13_1_20cm_3_scaffold_5581_12
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11266..11757)
DNA (492bp) protein (164aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobact
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036611FA
phosphoketolase
13_1_20cm_3_scaffold_5581_13
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11754..12536)
DNA (783bp) protein (261aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=520454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellacea
Probable phosphoketolase n=3 Tax=Brucella canis RepID=N7KP35_BRUCA
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein
13_1_20cm_3_scaffold_5581_14
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12562..13032)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000375685D
Universal stress protein {ECO:0000313|EMBL:AGL16948.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
universal stress protein
13_1_20cm_3_scaffold_5581_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13144..14307
DNA (1164bp) protein (388aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=47853 species="Bacteria; Actinobacteria; Micromono
acetate kinase n=1 Tax=Salinispora pacifica RepID=UPI000361FD29
acetate kinase
13_1_20cm_3_scaffold_5581_16
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14304..15308)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003688E59
CoA-binding domain-containing protein {ECO:0000313|EMBL:AGL16958.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N90
CoA-binding domain-containing protein
13_1_20cm_3_scaffold_5581_17
Cucumis sativus, Cucumis, Cucurbitales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(15449..16252)
DNA (804bp) protein (268aa)
infB; translation initiation factor IF-2 (EC:2.7.7.4)
PREDICTED: proline-rich receptor-like protein kinase PERK10-like n=2 Tax=Cucumis sativus RepID=UPI0002B4DC0C
Uncharacterized protein {ECO:0000313|EMBL:KGN52562.1}; TaxID=3659 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
13_1_20cm_3_scaffold_5581_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16974..17567)
DNA (594bp) protein (198aa)
Two-component hypoxia sensor histidine kinase response regulator dosT n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ96_9ACTO
Two-component hypoxia sensor histidine kinase response regulator dosT {ECO:0000313|EMBL:CCH16893.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonosp
ATPase domain-containing protein
13_1_20cm_3_scaffold_5581_19
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17524..18675)
DNA (1152bp) protein (384aa)
ATPase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FF22_VERMA
GAF domain-containing protein {ECO:0000313|EMBL:EWM65130.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ATPase domain-containing protein
13_1_20cm_3_scaffold_5581_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

18843..21200
DNA (2358bp) protein (786aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVS0_ROSS1
putative two-component hybrid sensor and regulator Tax=RBG_13_Chloroflexi_68_17_curated
putative two-component system sensor kinase
13_1_20cm_3_scaffold_5581_21
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21352..22614
DNA (1263bp) protein (421aa)
Putative multi-domain beta keto-acyl synthase n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9S200_STRCO
Putative multi-domain beta keto-acyl synthase {ECO:0000313|EMBL:CAB52353.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavu
SCJ21.07; beta keto-acyl synthase
13_1_20cm_3_scaffold_5581_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23026..23805
DNA (780bp) protein (260aa)
Long-chain acyl-CoA synthetase n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HJT9_MYCMM
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EWM19528.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
Displaying 22 items

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