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13_1_20cm_3_scaffold_6177

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_6177_1
unknown

Not on your lists

3..581
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_2
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

672..878
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000380D6B6
Uncharacterized protein {ECO:0000313|EMBL:EWM68071.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_6177_3
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(872..1183)
DNA (312bp) protein (104aa)
Putative carbon-nitrogen hydrolase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H009_ACTM4
Putative carbon-nitrogen hydrolase {ECO:0000313|EMBL:BAL86346.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missourien
putative carbon-nitrogen hydrolase
13_1_20cm_3_scaffold_6177_4
unknown

Not on your lists

1360..1737
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_5
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1623..2456)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TAG1_MICAI
Integral membrane protein {ECO:0000313|EMBL:EWM68069.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_6177_6
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2495..3064
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DF165
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EWM68068.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora
Cupin 2 barrel domain-containing protein
13_1_20cm_3_scaffold_6177_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3061..4347)
DNA (1287bp) protein (429aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPD3_9ACTO rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporace
ATP-dependent clp protease, ATP-binding subunit clpx
13_1_20cm_3_scaffold_6177_8
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4505..5134)
DNA (630bp) protein (210aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPD4_9ACTO rbh
endopeptidase Clp rbh
13_1_20cm_3_scaffold_6177_9
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5148..5771)
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Salinispora arenicola (strain CNS-205) RepID=A8M1K9_SALAI
13_1_20cm_3_scaffold_6177_10
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6066..6941
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ88569.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
13_1_20cm_3_scaffold_6177_trna_2
unknown

Not on your lists

comp(7302..7375)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_6177_trna_1
unknown

Not on your lists

7479..7549
DNA (71bp)
transferRNA
13_1_20cm_3_scaffold_6177_11
unknown

Not on your lists

comp(8041..8850)
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8905..9561)
DNA (657bp) protein (219aa)
Response regulator receiver protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDI1_STRRD
Response regulator receiver protein {ECO:0000313|EMBL:ACZ86270.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporan
response regulator receiver protein
13_1_20cm_3_scaffold_6177_13
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9558..11552)
DNA (1995bp) protein (665aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;
Two component signal transduction histidine kinase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RVC6_BLASD
Two component signal transduction histidine kinase
13_1_20cm_3_scaffold_6177_14
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12059..13762
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003752C37
Uncharacterized protein {ECO:0000313|EMBL:EST38595.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
13_1_20cm_3_scaffold_6177_15
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13839..14321)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82K06_STRAW
Uncharacterized protein {ECO:0000313|EMBL:BAC70309.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
hypothetical protein
13_1_20cm_3_scaffold_6177_16
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14877..15017
DNA (141bp) protein (47aa)
Glyoxalase I/lactoylglutathione lyase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I675_9ACTO
Glyoxalase I/lactoylglutathione lyase {ECO:0000313|EMBL:EDY60580.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus A
glyoxalase I/lactoylglutathione lyase
13_1_20cm_3_scaffold_6177_17
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15350..16048)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4REB8_9ACTO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEP74162.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_1_20cm_3_scaffold_6177_18
unknown

Not on your lists

comp(16713..16862)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_19
unknown

Not on your lists

16915..17154
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_20
unknown

Not on your lists

comp(17148..18266)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_20cm_3_scaffold_6177_21
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18287..19708)
DNA (1422bp) protein (474aa)
YD repeat protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGQ1_METP4
YD repeat protein {ECO:0000313|EMBL:ADN36346.1}; Flags: Precursor;; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Me
YD repeat-containing protein
Displaying 23 items

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