ggKbase home page

13_1_20cm_3_scaffold_4119_10

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 8969..9478

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RC83_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 185.0
  • Bit_score: 214
  • Evalue 7.30e-53
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora. UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 185.0
  • Bit_score: 214
  • Evalue 1.00e-52
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 187.0
  • Bit_score: 209
  • Evalue 6.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora sp. ATCC 39149 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCAGCTGGTCATCGGGCGGATCATCCGGGCGCACGGGATCCGCGGCGAGGTCGTCGTCCAGGTGACCACCGACGAGCCGGCCACCCGGTACACCGCCGGGGCCACCCTGGCCACCGATCCGGCCGCGGCCGGTCCGTTGACCATCGAATCGGTACGCCCCCACCAGGGGCGCCTGATCATCGCTTTCGACGGCGTTCTGGACCGGGACGGGGCCGAGGCGCTGCGCGGGCTACGCCTGTGTATCGACTCCGGCGACGTGGCCCCGCCCACGGACCCCGACGAGTTCCTCGACTTCCAACTGGTCGGACTCACCGCCGTGGACCCCGCCGGGGAGAATCTTGGCGAGGTGGTCGGCGTGGAGCACGGGCCGGCCGCCGACCTGCTGGTGCTGCGCCGGACCGACGGCGGTCGGACGCTGGTCCCGTTCGTCCGCGCGATCGTCCCGACGGTCGACCTGGACGCCGGCCGGGTCGTACTGACGCCGCCGGAAGGGTTGCTGGACCTGTGA
PROTEIN sequence
Length: 170
MQLVIGRIIRAHGIRGEVVVQVTTDEPATRYTAGATLATDPAAAGPLTIESVRPHQGRLIIAFDGVLDRDGAEALRGLRLCIDSGDVAPPTDPDEFLDFQLVGLTAVDPAGENLGEVVGVEHGPAADLLVLRRTDGGRTLVPFVRAIVPTVDLDAGRVVLTPPEGLLDL*