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13_1_20cm_3_scaffold_4119

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4119_1
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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67..405
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYA2_9ACTO
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCH16549.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini
glnB; Nitrogen regulatory protein P-II
13_1_20cm_3_scaffold_4119_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1456..2586
DNA (1131bp) protein (377aa)
PII uridylyl-transferase (EC:2.7.7.59)
PII uridylyl-transferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAJ8_VERMA
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
13_1_20cm_3_scaffold_4119_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2630..4177
DNA (1548bp) protein (516aa)
Signal recognition particle protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LYT7_9ACTO rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromon
ffh; signal recognition particle protein
13_1_20cm_3_scaffold_4119_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4203..5000
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QHD3_CATAD
Uncharacterized protein {ECO:0000313|EMBL:EWM17165.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_1_20cm_3_scaffold_4119_5
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5024..6100
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00035C2E83 rbh
Amidohydrolase {ECO:0000313|EMBL:ADL44943.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27
amidohydrolase rbh
13_1_20cm_3_scaffold_4119_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6112..7455
DNA (1344bp) protein (448aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=263358 species="Bacteria; Actino
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAK1_VERMA
13_1_20cm_3_scaffold_4119_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7455..8084
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035F38A2
Uncharacterized protein {ECO:0000313|EMBL:ADD42749.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
hypothetical protein
13_1_20cm_3_scaffold_4119_8
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8253..8714
DNA (462bp) protein (154aa)
30S ribosomal protein S16 n=1 Tax=Salinispora pacifica RepID=UPI0003804B47
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain A
rpsP; 30S ribosomal protein S16
13_1_20cm_3_scaffold_4119_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8689..8949
DNA (261bp) protein (87aa)
UPF0109 protein L083_6873 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPN2_9ACTO
UPF0109 protein MCBG_02580 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_4119_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8969..9478
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RC83_9ACTO
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.
rimM; 16S rRNA-processing protein RimM
13_1_20cm_3_scaffold_4119_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9492..10250
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31) rbh
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAK6_VERMA rbh
13_1_20cm_3_scaffold_4119_12
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10344..10700
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=1 Tax=Salinispora arenicola (strain CNS-205) RepID=RL19_SALAI
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain
rplS; 50S ribosomal protein L19
13_1_20cm_3_scaffold_4119_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10859..11446
DNA (588bp) protein (196aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospor
Signal peptidase I n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYC4_9ACTO
signal peptidase I
13_1_20cm_3_scaffold_4119_14
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11685..12317
DNA (633bp) protein (211aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora
Signal peptidase I n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RC87_9ACTO
signal peptidase I
13_1_20cm_3_scaffold_4119_15
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12328..12783
DNA (456bp) protein (152aa)
NUDIX hydrolase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SXL2_MICAI
MutT/NUDIX family protein {ECO:0000313|EMBL:EWM65441.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
NUDIX hydrolase
13_1_20cm_3_scaffold_4119_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12783..13538
DNA (756bp) protein (252aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYC7_9ACTO
ribonuclease H
13_1_20cm_3_scaffold_4119_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13663..13986
DNA (324bp) protein (108aa)
Uncharacterized protein n=4 Tax=Micromonosporaceae RepID=F4FBH7_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AEB43439.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
hypothetical protein
13_1_20cm_3_scaffold_4119_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13996..14184)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LTY4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGL20391.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
hypothetical protein
13_1_20cm_3_scaffold_4119_19
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14836..16011)
DNA (1176bp) protein (392aa)
Class V aminotransferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RC92_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65551.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
class V aminotransferase
13_1_20cm_3_scaffold_4119_20
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16021..16944)
DNA (924bp) protein (308aa)
integrase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003775F1D rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
putative integrase/recombinase
13_1_20cm_3_scaffold_4119_21
unknown

Not on your lists

17235..17423
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_3_scaffold_4119_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18091..19611)
DNA (1521bp) protein (507aa)
Mg chelatase-related protein (Putative subunit) n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYD6_9ACTO rbh
Mg chelatase-related protein (Putative subunit) {ECO:0000313|EMBL:CCH16583.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromo
hypothetical protein
13_1_20cm_3_scaffold_4119_23
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19781..21301
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000379DFCB
Uncharacterized protein {ECO:0000313|EMBL:ETK32074.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
glucose/sorbosone dehydrogenase
13_1_20cm_3_scaffold_4119_24
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21317..21676)
DNA (360bp) protein (120aa)
UPF0102 protein L083_6855 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LYP1_9ACTO
UPF0102 protein L083_6855 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
endonuclease
13_1_20cm_3_scaffold_4119_25
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21757..22521)
DNA (765bp) protein (255aa)
Aminotransferase class I and II n=2 Tax=Micromonospora RepID=D9TEY8_MICAI
Aminotransferase class I and II {ECO:0000313|EMBL:ADL48961.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiac
class I and II aminotransferase
Displaying 25 items

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